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SCN18_13_7_16_R2_B_scaffold_5356_4

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(2907..3374)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAM9_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 155.0
  • Bit_score: 212
  • Evalue 2.50e-52
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 155.0
  • Bit_score: 212
  • Evalue 7.10e-53
Pilus assembly protein TadB {ECO:0000313|EMBL:KGH45499.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 155.0
  • Bit_score: 212
  • Evalue 2.70e-52

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 468
CGCGAACTGCACCGCCGCGAGCAGGTGATGCTCGGCGAACTCCCCGTCGTCGCCGACCTGCTAGCCCTCGCCGTCGCCGCCGGAGAGGCTCCGGTGGATGCCCTCGACCGCGTGGCGCGGGTGACCGGGGGTGAGCTGGCCGGCGACCTCGCGCAGGCCCTCGCGCGGGCGCGGGCCGGCACGCCGCTGGCCACCGCCCTCGGCGACCTCGCCGACCGGACGACGCTGGAGCCGTTCGCCCGCTTCGTCGACGGCCTGCTCGTGGCGATCGAGCGCGGCACCCCGCTGGCCGGGGTGCTGCGGGCGCAGGCGGTGGACGTCCGCGAGGCCGGCAAGCGCGCGCTGATCGAGAGCGGCGGCCGGCGCGAGATCGCGATGCTCGTCCCGGTCGTGTTCCTCGTCCTCCCGGTGACCGTGCTCTTCGCGCTCTTCCCCGGACTGTTGACCCTGACCTCGCTCACCCACTGA
PROTEIN sequence
Length: 156
RELHRREQVMLGELPVVADLLALAVAAGEAPVDALDRVARVTGGELAGDLAQALARARAGTPLATALGDLADRTTLEPFARFVDGLLVAIERGTPLAGVLRAQAVDVREAGKRALIESGGRREIAMLVPVVFLVLPVTVLFALFPGLLTLTSLTH*