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SCN18_13_7_16_R2_B_scaffold_3968_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 2..2053

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI000312D812 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 683.0
  • Bit_score: 1256
  • Evalue 0.0
ATP-dependent Clp protease ATP-binding subunit ClpC1 {ECO:0000313|EMBL:KJL30540.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 682.0
  • Bit_score: 1258
  • Evalue 0.0
clpC; ATPase with chaperone activity, ATP-binding subunit similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 672.0
  • Bit_score: 1210
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
GACCAGACGCCGAACGCGCAGGGCGGCTCGCAGGTGCTCGACCAGTTCGGTCGCAACCTCACGCAGGCCGCGCGCGACAACAAGCTCGACCCGGTGATCGGCCGTGAGAAGGAGATCGAGCGGGTCATGCAGATCCTCTCCCGCCGCTCCAAGAACAACCCCGTGCTGATCGGCGAGCCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGTCTGGCTCAGGCCATCGTGAAGAACGAGGTGCCCGAGACCATCAAGGACAAGCAGCTCTACTCGCTCGACCTGGGTTCGCTCATCGCCGGTTCCCGTTACCGCGGCGACTTCGAGGAGCGCCTGAAGAAGGTCACGAAGGAGATCCGCACCCGCGGCGACATCATCGTCTTCATCGACGAGATCCACACCCTCGTGGGGGCCGGCGCGGCCGAGGGCGCGATCGACGCGGCTTCGATCCTGAAGCCGCTCCTCGCCCGAGGCGAGCTGCAGACGATCGGTGCCACGACGCTCGACGAGTACCGCAAGCACTTCGAGAAGGATGCCGCGCTCGAGCGCCGCTTCCAGCCGATCCAGGTCGCCGAGCCGTCGCTGCCCCACGCGATCAACATCCTGAAGGGGCTGCGCGACCGCTACGAGGCGCACCACAAGGTGCAGATCACCGACGGTGCGATCGTCGCTGCGGCGAACCTCGCCGACCGCTACATCAGCGACCGGTTCCTCCCGGACAAGGCGATCGACCTGATCGACGAGGCGGGCGCACGCCTGCGGCTGTCGATCCTGTCCAGCCCGCCCGAGCTGCGCGAGTTCGACGACAAGATCGCCGCCGTGCGCGAGCAGAAGGAGCTGGCGAGCGAGGAGCAGGACTTCGAGAAGGCCGCGTCGCTGCGCGACGAGGAGAAGTCGCTGCTCGCCGAGCGCCTGCGCCTCGAGAAGCAGTGGCGCTCGGGTGACGTCGCGACCCACGCGATCGTCGACGAGGGACTGATCGCCGAGGTGCTCGCCCAGGCGACCGGCATCCCGGTGTTCAAGCTCACCGAGGAGGAGAGCTCGCGCCTCGTCTTCATGGAGAAGGCGCTGCACCAGCGCGTCATCGGCCAGGAGGAGGCGATCGCCGCGCTGTCGAAGACGATCCGCCGTCAGCGGGCCGGGCTCAAGGACCCGAAGCGTCCGTCGGGGTCATTCATCTTCGCCGGGCCGACCGGTGTCGGAAAGACCGAGCTCGCCAAGGCGCTCGCGGAGTTCCTCTTCGACGACGAGGGCGCGCTGATCTCGCTCGACATGTCGGAGTTCGGCGAGAAGCACACCGTGTCGCGGCTGTTCGGTGCCCCTCCCGGGTTCGTCGGCTTCGAAGAGGGCGGTCAGCTCACCGAGAAGGTGCGCCGCAAGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCCCACCCGGACATCTTCAACTCGCTCCTGCAGATCCTCGAAGAGGGCCGGCTGACCGACGGTCAGGGTCGCGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCGCCCGTGACATCGCGGGCGGCCCGGTCGGCTTCCAGGTCGAGGGCGACTCCGCGACGTCCTACGACCGTATGAAGGGGAAGGTCAACGAGGAGCTGAAGCGCCACTTCAAGCCCGAGTTCCTGAACCGTGTCGACGACATCATCGTGTTCCCGCAGCTGTCGAAGCCCGAGCTGGTGCAGATCGTGGATCTGTTCACCAAGCGCCTCGGCGAGCGGCTGCTCGACCGCGACATGACGATCGAGCTGTCGCTGCCCGCGAAGGAGCGGCTCATCGAGATCGGCTTCGATCCCGCACTCGGCGCGCGCCCGCTGCGTCGCGCGATGCAGCACGAGGTCGAGGACCGCCTGAGCGAGAAGATCCTGCACGGCGAGCTGAACGCGGGCGACCACGTTAAGGTCGACGCCGAGAACGGCGAGTTCGTCTTCGAACACGGCCCGCGCGGCGAGAAGGTCGCCGTCGGTGTCGTCGCCGGAGGCGAGATCACCGCGACACCGGACCTCGCGATCACCTCGGAGTGA
PROTEIN sequence
Length: 684
DQTPNAQGGSQVLDQFGRNLTQAARDNKLDPVIGREKEIERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKNEVPETIKDKQLYSLDLGSLIAGSRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATTLDEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQITDGAIVAAANLADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDDKIAAVREQKELASEEQDFEKAASLRDEEKSLLAERLRLEKQWRSGDVATHAIVDEGLIAEVLAQATGIPVFKLTEEESSRLVFMEKALHQRVIGQEEAIAALSKTIRRQRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFDDEGALISLDMSEFGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVIIMTTNLGARDIAGGPVGFQVEGDSATSYDRMKGKVNEELKRHFKPEFLNRVDDIIVFPQLSKPELVQIVDLFTKRLGERLLDRDMTIELSLPAKERLIEIGFDPALGARPLRRAMQHEVEDRLSEKILHGELNAGDHVKVDAENGEFVFEHGPRGEKVAVGVVAGGEITATPDLAITSE*