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SCN18_13_7_16_R2_B_scaffold_6273_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(3..716)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AC200 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 238.0
  • Bit_score: 314
  • Evalue 7.20e-83
ABC-type antimicrobial peptide transport system,permease component {ECO:0000313|EMBL:CDK01489.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 239.0
  • Bit_score: 307
  • Evalue 9.50e-81
peptide ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 243.0
  • Bit_score: 302
  • Evalue 8.10e-80

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTACTGGACCTATCTGCGCCGTGAACTCGGCGGACGCAAGAAGCAGACGATCATCGTCGCGGCGGGGCTCGCGATCGCCATCGCCCTGGTGATCGTCGTGAATGCGCTGTCGGCCGGCGTGAAGGACGCCCAGGCGCAGGCGCTCCAATCCGTCTACGGCGTCGGAACCGACCTCACCGTCACCGGCGCGGCGCAGCAGCCCGGCAGCGGCGCCGGGGGAGGGCAGCAGTTCGACTTCGGCAGGAACGACGGGACCTCCGCGGACGGGACCACGACCATCGCGCGCTCGCGTCTGATGACGGACTTCCGTCGCGGAACGCTGGACTCGACCGTGCTGGCCAAGGTCGAGAAGGTCGACGGGGTGTCGTCGGCGTCTGCGGCGCTGAGCCTCACGAACACCTCGTTCTCGGGGCAGCTGCCCGACCGCTCGCAGGTCCAGCAGGGTCAGCCCGGCTCCGCTCCTTCGACCGGCTCGGATGGCGCGGGCGGCAGCAGCTTCAAGATCACCTCGTTCAGCGTGCTCGGCATCGACCCGGCGAACACCTCGGTCGGACCTCTCTCCGCGGTGACCGTCTCGAGCGGCCGCGCGCTCGCGAGCTCGGATGCCGGCTCCGACGTTGCCGTCGTGGACGCGACCTACGCCAAGACGAACGACCTGGCGGTGGGCGGCACCGTGGAGGTCGCGGGCACGAAGATGAAGATCGTCGGAGTC
PROTEIN sequence
Length: 238
MYWTYLRRELGGRKKQTIIVAAGLAIAIALVIVVNALSAGVKDAQAQALQSVYGVGTDLTVTGAAQQPGSGAGGGQQFDFGRNDGTSADGTTTIARSRLMTDFRRGTLDSTVLAKVEKVDGVSSASAALSLTNTSFSGQLPDRSQVQQGQPGSAPSTGSDGAGGSSFKITSFSVLGIDPANTSVGPLSAVTVSSGRALASSDAGSDVAVVDATYAKTNDLAVGGTVEVAGTKMKIVGV