ggKbase home page

SCN18_13_7_16_R2_B_scaffold_8368_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 3..2528

Top 3 Functional Annotations

Value Algorithm Source
ricin B lectin, partial n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B31D49 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 744.0
  • Bit_score: 1010
  • Evalue 7.50e-292
Uncharacterized protein {ECO:0000313|EMBL:ETK32884.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 828.0
  • Bit_score: 977
  • Evalue 9.90e-282
ricin B lectin similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 560.0
  • Bit_score: 661
  • Evalue 1.80e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2526
GTCGTCGCGGGCGTCGCGGCCGTCGCCGCACCCGCGAGCGCCGCCGCACCCGCGGCCAACACCATCGTCGTGCACGCCGACCAGCCGTTCCGGCCGGTGACCCACGTGGCGACCGGATCGCTCTACGGTCTGGCGAACGCCACCACCCCGTCGGATGCGCTCGTCCAGGCGATCAAGCCGAACACGTTCGTCATGATGCCGATCGGCGGACACCAGCAGGGCAGCGGCGACATCGGCAAGACATGGCAGAAGGCCGCCGCGGCCGGGGCCAAGGTCGTCGACCGACTCTCCGACTACTACGCGGGCTGGCCGTACCAGTTCAGCTGGTCGACCTGGGACCAGGTCGTCACGCAGCAGATCCAGCAGGTCCAGGCATCCGGCATGACGAATCTCGCGGCCTACGCGCCCTGGAACGAGTCCGACAACACCTGGCTCGCGTCCAACGGCACGTTCGAGGACTTCTGGACGCACACGTACCGCCTCATCCGCAGCCTCGACCCGACGACCCCGATCCAGGGGCCGAGCTTCTCGGACAACATCAACGACATGCAGAACTTCCTGCAGAACGCGGTCGCGACCGACACCGTGCCGGATGTCCTCGCGTGGCACGAGCTGATCCGCTCCTCGAAGATCGCCGACGACGTCGCCAAGGTCGAGGCGATGGAGGACGCGCTCGGGATCGCACGCCGGCCCATCGACATCGAGGAGTACGCGGCGCCCGCCGAGGTCGGGATCCCGGGAGACCTCATCGGATACATCGCCAAGTTCGAGCGCCTGGGCATCCGCAACGCCGAGCTCGCGTTCTGGAACCAGTCCGGCGCGCTCGGCGACCTGCTCACCGGTCAGGGCGGCAGCCCGAACGGCGCCTACTGGATGTACACGTGGTACGCCGGGATGAGCGGAGACATGGTCACCACCACGCCTCCGGGCAACAACGATCTCGACGCCGCGGCATCCGTGACCGCCGCAAAGAAGGAGGTCGACGTCATCACGGGCGGGACGAGCGGTCCCGCGTCCGTTCAGGTCGCGGGCCTCGACAAGCTCGCGGTGGGATCGAAGGTCGACGTCAAGGTGGAGTTCACCCCGGCATACGGCCGTACCGTGGCCGTTGCAGGGCCGACGGCCATCTCCGACACGACGTACCAGGTCGGCGATGACGGATCGATCAGCGTTCCGATCGTGATGAACCCGGCATACGGCTATCACGTCGTCGTCACCCCGGCATCCGCGTCGGCGAGTTCGCTCGCGGGCACCTATACGATCGCGAACCTGAACAGCGGGCTGTCGCTCACCGCGGGTGACGCCGTCAGCCAGGGATCGCTCCCCTCAGGGGGCAGCACCGCTCAGACCTGGAAGCTCGTCGCTGCAGGCAACGGTCTCTACAAGATCGTGAGCGCGGTCGATGGGCGGGTCCTCGGCATTCCCAGCGGGGCTGCGGCCAACGGCTCGGCACCGGCGCTCGCCGCCGACACGGGCGTCGACGGACAGCTCTGGCAGCTGGTCCCGGACGGCAAGGGGCACTACCGGCTCGCCAACTTCGGCTCGGGTCTCGTGCTCGGCGTCGACGGGATGAGCAAAGCCGACGGCGCCCGGGTCGTCCAGTGGACCGACGGTGCCAGCACCTCGGGATGCACTGCGACGGGCGCCCGCCAGCCCGGCAAGATCGGCACGGCGCTGTCGTTCTGCAACAGCAACGCGTACGCGACGCTGCCCACGGGAGCGGTGAGCTCGCTCACCGGCGACTACTCGGTGTCGGTCTGGGTGAACCCGGCCAGCAACACCGCGTGGCAGCGCGTTTTCGACATCGGGAGCAGCAGCAACGCGAGCATGTTCCTCACCGTCAACGACGGCAGCGAACTCCGCTACGCCATCACGACGAGCGGCGCAGGCGGCGAGCAGCGCCTCAACAGCAGCAACCCCAAGACGCTGCCGCTGAACCAGTGGTCCCTCGTCACGGTCACCGTCGCCGGCACCACCGGCACGATGTACGTGAACGGGCAGGTCGTGGCCACGAACACCGCGATGACCGTGCACCCCTCCGCGTTCGGGCAGAGCACACGCAACTACCTCGGCAAGTCGCAGTACAGCGACCCTGCGCTCAACGGCGCCGTAGATGACTTCAACATCTACAACCGCGCGCTGAGCGCCGCCGAGGTCGCGACGCTCGCGAGCGGGCAGCCCGGCGCGGGCAACGTCGTGCACTACGCGTTCGACGAGGCGGGCGGCACGACGCTCGTCGACTCCTCGGGCGCGGGCCGCACAGGCGCCGTCGTGGCGGGCTCCGGCTCGACGAGCACGACCACGGCGACCGACGCGGCGACGGCCGACCACTTCTGGTCGCTGACCGCTGTGGCCGCCCCGCAGGCACCGTCGGGTGTCTCCGCCACGGCGACGGCGGCGGCCGTGACCGTCTCGTGGTCGGCCCCCGCCGCCGACGGGGGTGCACCGATCACGGGGTACCGCGTCTACCGCGACGGCACGACCGACCCGGTCGCGACCGTGGGCGCGGATGCGACCACGGCATCC
PROTEIN sequence
Length: 842
VVAGVAAVAAPASAAAPAANTIVVHADQPFRPVTHVATGSLYGLANATTPSDALVQAIKPNTFVMMPIGGHQQGSGDIGKTWQKAAAAGAKVVDRLSDYYAGWPYQFSWSTWDQVVTQQIQQVQASGMTNLAAYAPWNESDNTWLASNGTFEDFWTHTYRLIRSLDPTTPIQGPSFSDNINDMQNFLQNAVATDTVPDVLAWHELIRSSKIADDVAKVEAMEDALGIARRPIDIEEYAAPAEVGIPGDLIGYIAKFERLGIRNAELAFWNQSGALGDLLTGQGGSPNGAYWMYTWYAGMSGDMVTTTPPGNNDLDAAASVTAAKKEVDVITGGTSGPASVQVAGLDKLAVGSKVDVKVEFTPAYGRTVAVAGPTAISDTTYQVGDDGSISVPIVMNPAYGYHVVVTPASASASSLAGTYTIANLNSGLSLTAGDAVSQGSLPSGGSTAQTWKLVAAGNGLYKIVSAVDGRVLGIPSGAAANGSAPALAADTGVDGQLWQLVPDGKGHYRLANFGSGLVLGVDGMSKADGARVVQWTDGASTSGCTATGARQPGKIGTALSFCNSNAYATLPTGAVSSLTGDYSVSVWVNPASNTAWQRVFDIGSSSNASMFLTVNDGSELRYAITTSGAGGEQRLNSSNPKTLPLNQWSLVTVTVAGTTGTMYVNGQVVATNTAMTVHPSAFGQSTRNYLGKSQYSDPALNGAVDDFNIYNRALSAAEVATLASGQPGAGNVVHYAFDEAGGTTLVDSSGAGRTGAVVAGSGSTSTTTATDAATADHFWSLTAVAAPQAPSGVSATATAAAVTVSWSAPAADGGAPITGYRVYRDGTTDPVATVGADATTAS