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SCN18_13_7_16_R2_B_scaffold_8180_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(2..2569)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 847.0
  • Bit_score: 1456
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Microbacterium yannicii RepID=UPI0002E99FBC similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 865.0
  • Bit_score: 1488
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 855.0
  • Bit_score: 1454
  • Evalue 0.0

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2568
ACGCTGTCGGACACGAACCGCGAGTTCCTCGAGGCGACCTGGAGCGCCGCCACGGCCGGCGCACAGACCCCCATCGACCTCGGTGCGGGGGACTTCGTCAGCCTCGGGCGCCTGCGCGAGGTGGCACGCGACCGCGGCGGGGTGTGGTGGAGCCTCAGCGCCTTCGACTCGGGTGCGGCGGATGCCGCGGCCGAGGGGCTCGCCGAGCGGGACGACACGACGGCCATCCGCATCGCGGCATCGGGCGTGCCCTCGTTCCACGGCAACGTCGACGGAGCGACCGCGCACATCGCCGAGCTTCTCGCGTCGGGGTGGCGAGTCGTGGTCGCGGCATCCGGGGCCGGGCTCGCCGACCGCGCGCGCGACGTGCTCGCCGAGCGCGGGATCGCGGCGCGGCGCGTCGATCAGGTGCTGGAGCCGCCGGAGCCGGGTGTCGTGCACGTGGTCGCCGCGACGCTCGAGCGCGGCTTCGAGGCGCCCGACGCTCAGCTCGCCGTCCTGACCGAGACCGAGTTCTACGGGCGCACGATCGGCAGCGACGCGCGCATCGTGAAGAAACTAGCGACTCGCCGTCGCAACGTAGTCGACCCGCTGCAGCTCAAGGCGGGCGACTACGTGGTCCACGCGACCCACGGCATCGGCCGGTTCGTCGAGCTCACCCAGCGCGAAGTGTCCAGCGGCGGCCGCCACGCGGTGAAGAGCGTGCGCGAGTACCTGGTGCTCGAGTACGCGCCGAGCAAACGCGGCTACCCCGGCGACAAGCTGTACGTCCCCACCGATCAGCTCGACCTGCTGTCGCGCTACGTCGGCGGCGAGGCGCCCGTCCTGTCGAAGATGGGCGGGAGCGACTGGGCGCAGGCCAAGGGCCGCGCGCGCAAGGCGGTGCGCGACATCGCCGTGGAGCTGGTGAAGCTCTACTCGGCGCGCATGGCGTCCAAGGGGCACGCGTTCGGCCCGGACACCCCGTGGCAGCGCGAGCTGGAGGAGGCGTTCCCCTTCGCCGAGACGCCCGATCAGCTGCAGACCGTCGACGAGATCAAGGCCGACATGGAGAAGCCGATCCCGATGGACCGCCTCCTCTCCGGCGACGTCGGGTTCGGCAAGACCGAGGTCGCGGTGCGCGCCGCCTTCAAGGCCATCCAGGACGGCAAGCAGGTCGCGATGCTCGTGCCCACGACGCTCCTCGTGAAGCAGCACCTCGACACGTTCACCGAGCGGTTCGCCGGCTTCCCCGTGAAGGTGCGGCCGCTCTCGCGGTTCCAGACCGACAAGGAAGCACGCGAGACGCTCGCGGGCCTCACCGACGGCACGGTCGACATGGTGATCGGGACCCACCGCATCCTCACCGAGAAGGTGATCTTCAAGGACCTCGGCCTGATGATCATCGACGAGGAGCAGCGCTTCGGCGTCGAGCACAAGGACCAGCTGAAGAAGCTCAAGACCAACGTCGACATCCTCGCGATGAGTGCGACGCCGATCCCGCGCACGCTCGAGATGGCGGTCACCGGCATCCGCGAGATGTCGACGCTGCAGACGCCGCCGGAGGATCGCCATCCGATCCTGTCGTACGTCGGACCGCGCAACGACAAGCAGATCGCCGCCGCCATCCGGCGCGAGCTGCTGCGCGAGGGACAGGTCTTCTACGTCCACAACCGGGTGCAGTCGATCCAGCGGGTCGCCGCCGAACTGGCCGAGCTCGTGCCCGAGGCGCGCATCGCGGTCGCGCACGGGCAGATGGGCGAGCACGCCCTCGAGCAGGTCGTCGACGACTTCTGGGAGCGCCGCGCCGACGTGCTGGTGTGCACGACGATCGTCGAGACCGGGCTCGACATCTCCAACGCGAACACGATCATCATCGACCGCGCTGACAAGTACGGGCTGTCGCAGCTGCATCAGCTCCGCGGACGCGTGGGGCGCGCCCGCGAGCGCGCATACGCCTACTTCCTGTACGACGAGCAGAAGCCGCTGTCCGAGACGGCTGCCGACCGCCTCGAGACGATCGCCGTCAACAACGACCTGGGCTCGGGGATGCAGGTGGCGCTGAAGGACCTCGAGCTGCGCGGGGCGGGGAACCTCCTCGGCGCGGAGCAGGCCGGCCACATCGCCGGCGTCGGGTTCGATCTCTATCTGCGGATGATCGGCGAGGCCGTCGCGACCTTCCGCGGCGAAGACGCCGAGTCGCCCGTCGAACTGCGGCTCGAGCTGCCCGTGCAGGCGCGCATCCCGGAGTCCTACATCGACAGCGAGCGGCTCCGGCTCGAGGCGTACCAGAAGCTCTCGGCTGCGGCATCCGCGACCGCGAAGGACGACGCCATCGACCTCGTGGTCGACGAACTCCGCGACCGCTACGGCGAGCCGCCCGCCGAGGTGGAGGGGCTGCTCGCGATCGCTCGTCTGCGACGCCGCGCCGCCCAGGCGGGGCTGACGGACGTCGTCGCGATGGGCCCGAACCTGCGCATCGCCCCCGCACGGCTGCCCGACTCGATGCGCGTGCGCCTGCAGCGGCTCCACCCCAAGGCGAAGCTGCTCTCCGGCGACTGGGACGTGCTCTTCCTCGACGAGCCCACC
PROTEIN sequence
Length: 856
TLSDTNREFLEATWSAATAGAQTPIDLGAGDFVSLGRLREVARDRGGVWWSLSAFDSGAADAAAEGLAERDDTTAIRIAASGVPSFHGNVDGATAHIAELLASGWRVVVAASGAGLADRARDVLAERGIAARRVDQVLEPPEPGVVHVVAATLERGFEAPDAQLAVLTETEFYGRTIGSDARIVKKLATRRRNVVDPLQLKAGDYVVHATHGIGRFVELTQREVSSGGRHAVKSVREYLVLEYAPSKRGYPGDKLYVPTDQLDLLSRYVGGEAPVLSKMGGSDWAQAKGRARKAVRDIAVELVKLYSARMASKGHAFGPDTPWQRELEEAFPFAETPDQLQTVDEIKADMEKPIPMDRLLSGDVGFGKTEVAVRAAFKAIQDGKQVAMLVPTTLLVKQHLDTFTERFAGFPVKVRPLSRFQTDKEARETLAGLTDGTVDMVIGTHRILTEKVIFKDLGLMIIDEEQRFGVEHKDQLKKLKTNVDILAMSATPIPRTLEMAVTGIREMSTLQTPPEDRHPILSYVGPRNDKQIAAAIRRELLREGQVFYVHNRVQSIQRVAAELAELVPEARIAVAHGQMGEHALEQVVDDFWERRADVLVCTTIVETGLDISNANTIIIDRADKYGLSQLHQLRGRVGRARERAYAYFLYDEQKPLSETAADRLETIAVNNDLGSGMQVALKDLELRGAGNLLGAEQAGHIAGVGFDLYLRMIGEAVATFRGEDAESPVELRLELPVQARIPESYIDSERLRLEAYQKLSAAASATAKDDAIDLVVDELRDRYGEPPAEVEGLLAIARLRRRAAQAGLTDVVAMGPNLRIAPARLPDSMRVRLQRLHPKAKLLSGDWDVLFLDEPT