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SCN18_13_7_16_R2_B_scaffold_11935_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(545..1990)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 482.0
  • Bit_score: 870
  • Evalue 9.70e-250
elongation factor 4 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380607E similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 481.0
  • Bit_score: 882
  • Evalue 1.00e-253
lepA; membrane GTPase LepA similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 478.0
  • Bit_score: 842
  • Evalue 4.40e-242

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
AACGACCTGCACATCATCCCGGTGCTGAACAAGATCGACCTGCCGGCGGCGGACCCGGACAAGTTCGCGCTCGAGCTGGCGAACCTGATCGGCGGTCAGCCGGAGGACGTGCTGCGCGTCTCGGGGAAGACGGGTCAGGGCGTCGAAGAGCTGCTCGATCTGATCGTGCGCGACATCCCGGCGCCCACGGGCGACGCCGACGCTCCGGCGCGGGCGATGATCTTCGACTCCGTGTACGACGCGTATCGAGGCGTGGTCACCTATGTCCGTATGGTCGACGGCAAGCTCGAGCCGCGCGAGCGCATCCAGATGATGTCGACGCGCGCGGCCCACGAGCTCCTCGAGATCGGCGTCTCCAGCCCGGAGCCGACGCCGACGAAGGGCCTGGGGGTCGGGGAGGTCGGCTATCTGATCACCGGCGTGAAGGACGTCCGCCAGTCCAAGGTGGGCGACACCGTCACCAACCTGCGCAAGCCCGCCACCGACGCCCTGCCGGGGTACACCGACCCCAAGCCGATGGTCTTCTCGGGCATCTACCCGATCGACGGCAGCGACTATCCCGACCTGCGGGAGGCGCTCGACAAGCTGAAGCTGTCCGACGCCGCCCTGCAGTACGAACCCGAGACCTCTGTGGCCCTCGGCTTCGGCTTCCGATGCGGATTCCTCGGCCTCCTGCACCACGAGATCATCACGCAGCGGCTTGCGCGCGAGTTCGACCTCGACCTGATCACGACCGCGCCCTCCGTCATCTACGAGGTCACCACCGACACGGGCAAGACCATCACGGTGACAAACCCGAGCGAGTATCCCGACGGGAAGGTGGCCTCGGTCTCCGAGCCCATGGTGAAGGCCGCGATCCTCACTCCGAAGGACTACGTCGGCACCGTCATGGAGCTGTGCCAGTCGCGGCGCGGCGCACTGCTCGGAATGGAGTACTTCAGCGAGGAGCGCGTCGAGCTGCGGTACGACATGCCGCTCGGGGAGATCGTCTTCGACTTCTTCGACCAGCTGAAGAGCCGCACGCAGGGCTACGCCTCGCTGGACTACGAGCCGAGCGGGCAGCAGGAGGCGGACCTGGTCAAGGTCGACATCCTGCTGCAGGGCGAGAAGGTCGACGCCTTCAGCTCGATCGTCCACCGCGACAAGGCGTACGCCTACGGCACGATGATGACCGAGCGTCTGCGCAAGCTCATCCCGCGCCAGCAGTTCGAGGTTCCCATCCAGGCGGCGATCGGTGCCCGCATCATCGCGCGGGAGTCGATCCGTGCCATGCGCAAGGACGTGCTGGCGAAGTGCTACGGCGGTGACATCACGCGCAAGCGCAAGCTCCTCGAGAAGCAGAAGGAGGGCAAGAAGCGCATGAAGATGGTCGGGCGCGTCGAGGTTCCCCAGGAGGCCTTCATCGCGGCGCTGTCGGGTGACGTCGAAGGCAAGGACAAGAAGTAG
PROTEIN sequence
Length: 482
NDLHIIPVLNKIDLPAADPDKFALELANLIGGQPEDVLRVSGKTGQGVEELLDLIVRDIPAPTGDADAPARAMIFDSVYDAYRGVVTYVRMVDGKLEPRERIQMMSTRAAHELLEIGVSSPEPTPTKGLGVGEVGYLITGVKDVRQSKVGDTVTNLRKPATDALPGYTDPKPMVFSGIYPIDGSDYPDLREALDKLKLSDAALQYEPETSVALGFGFRCGFLGLLHHEIITQRLAREFDLDLITTAPSVIYEVTTDTGKTITVTNPSEYPDGKVASVSEPMVKAAILTPKDYVGTVMELCQSRRGALLGMEYFSEERVELRYDMPLGEIVFDFFDQLKSRTQGYASLDYEPSGQQEADLVKVDILLQGEKVDAFSSIVHRDKAYAYGTMMTERLRKLIPRQQFEVPIQAAIGARIIARESIRAMRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKMVGRVEVPQEAFIAALSGDVEGKDKK*