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SCN18_13_7_16_R2_B_scaffold_13980_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 513..1778

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Microbacterium RepID=H8E186_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 430.0
  • Bit_score: 502
  • Evalue 3.30e-139
Regulator {ECO:0000313|EMBL:EXJ51100.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 466.0
  • Bit_score: 515
  • Evalue 6.90e-143
hemagglutinin/hemolysin-like protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 421.0
  • Bit_score: 397
  • Evalue 3.30e-108

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Taxonomy

CN-SCN_Microbacterium_200x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGACACCGAACGACGCCGACGACGCGGCGATGCTGCACGACACGGCCGACGCCGACCTCGTGACGCGCACCCGCGCCGGCGACAGCGCGGCCTTCGGCGAACTCTGGCGCCGGCACTATGCGTCCGGGATGAGCGTCGCGCGGTCGGTCACGTCGAGCATCGATCCCGACGATCTCGTGCAAGAGGCCTACGTGCGGATCTTCCAGTCGATCCAGCGCGGCGGCGGCCCGACCGGCTCCTTCCGGGCGTACCTCTTCACGAGCATCCGCAACACGGCGGCGGCGTGGGGGCGCTCACGACGCGAGACCGCGGTCGACGAGTGGGAAGCGGTGGCGGATCCGTCCTCCACCGAGCGCGCCGCCGACGACGCACTCGACCGCAGCCTCACCCATCAGGCCTTCCGGAGCCTGCCCACCCGATGGCAGGAGGTGCTCTGGTACACCGAGATCGAGCAGATGAAGCCGGGCGAGATCGCTCCGCTGCTCGGCCTGCGCGCGACCGCGGTGGCACAGCTCGCCTTCCGCGCCCGAGAGGGGCTGCGTGAGGCGTGGATCCAGGCGCACCTGAAGTCGGTCGAAGACGGCTCCGACTGCCAGTGGACGATCGAACGCCTCGGCGCCTATTCGCGCAACAACCTGGGCAAGCGCGATCTGGCGAAGATCGAGAAGCACCTCCACGACTGCGCCCGCTGTGCGATCGTCGCCTCGGAGGCGAAGGAGGTCTCCGGCCGGCTGGTGCTCATCCTGTTGCCGCTCACGATCGGGATCGGGGCCAGCGCCGCCTACCTCGCGTCGGTGCAGGGCGGTGGCGCTCCCCTCACGGCGATGGCCGGGATGCCGTCGGGCATCGCCCCCGGCGCCGTGGTCGCGTCCGGCGGCACGGCGGGCGGAGGCGGCACGACCTCGTCGGCGGGATCCGCGGCGGCCGGACCGACGGCGGCGGGGACCGGATCGGCGGGCGTCGGTGTCGGCGGAGCCGTGGTCGGCACCGGCACGCTGACGGCGCTCATCACCGCGGGCGCGCTGGTGGCGGCGACGGTCGTGGCCGCGGTCGTCGTGCCCGCCGCGTTGCGCGCCCCGACGAGCACCGAGCGCCTCGACGCCGCCGGACCGGCCGTGGTCGAGACGACGACGCCGTCGGCCACCCCGACTCCGACGGCGACACCGACCGCGTCGCCCCGCCCGAGCGATGTGCCGACGCTCGCTCCGCAGGTCCCGGCGCCGCCGAGCGCGCGTCCGATCGCGAGTGCACCCACGAAGCCCTCT
PROTEIN sequence
Length: 422
MTPNDADDAAMLHDTADADLVTRTRAGDSAAFGELWRRHYASGMSVARSVTSSIDPDDLVQEAYVRIFQSIQRGGGPTGSFRAYLFTSIRNTAAAWGRSRRETAVDEWEAVADPSSTERAADDALDRSLTHQAFRSLPTRWQEVLWYTEIEQMKPGEIAPLLGLRATAVAQLAFRAREGLREAWIQAHLKSVEDGSDCQWTIERLGAYSRNNLGKRDLAKIEKHLHDCARCAIVASEAKEVSGRLVLILLPLTIGIGASAAYLASVQGGGAPLTAMAGMPSGIAPGAVVASGGTAGGGGTTSSAGSAAAGPTAAGTGSAGVGVGGAVVGTGTLTALITAGALVAATVVAAVVVPAALRAPTSTERLDAAGPAVVETTTPSATPTPTATPTASPRPSDVPTLAPQVPAPPSARPIASAPTKPS