ggKbase home page

SCN18_13_7_16_R2_B_scaffold_14802_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(3..371)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F0E33 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 122.0
  • Bit_score: 142
  • Evalue 2.50e-31
Lipid A core--O-antigen ligase {ECO:0000313|EMBL:KHK99455.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 121.0
  • Bit_score: 144
  • Evalue 5.50e-32
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 111.0
  • Bit_score: 125
  • Evalue 5.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGAGCCCCCGGATCCCCGCACGGTTCCACGGGCTCGCCGAGCTGCTGCGCTCCGCATCGATGGCGCGGGCGTACACCCTCACGACCTTCGGCGCGGTCCTCGGGTCTTCCGCCATCGAGTGGCTGGCCGGACTGGTGACCTATGCGACGGTGGTCGCCGGGCTCTGCGTGATCGGAGCCGCGATGCTCGTCGCGCGCCGCCGTGAGATCCGGTTCCTGCGGCTCGTTCCGGTGACCCTCCTGGTGTTCGCGGCGTGGGCGGGGGCCAGCATCTTCTGGACGACCTCCCGCGCGCACACCGCGCTCAGCTGGCTCTCGCTCGTGGCCGTCGCGTTCCTCGCGATCGTCGTCGGTCACGTGCGCGACACC
PROTEIN sequence
Length: 123
VSPRIPARFHGLAELLRSASMARAYTLTTFGAVLGSSAIEWLAGLVTYATVVAGLCVIGAAMLVARRREIRFLRLVPVTLLVFAAWAGASIFWTTSRAHTALSWLSLVAVAFLAIVVGHVRDT