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SCN18_13_7_16_R2_B_scaffold_16315_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(548..1030)

Top 3 Functional Annotations

Value Algorithm Source
CarD family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B331BE similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 160.0
  • Bit_score: 300
  • Evalue 7.30e-79
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:KJL38268.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 160.0
  • Bit_score: 300
  • Evalue 7.80e-79
transcriptional regulator, CarD-like regulator similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 160.0
  • Bit_score: 290
  • Evalue 1.60e-76

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Taxonomy

Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCTTTTTGAGGTTGGCGAGACGGTCGTTTACCCGCACCACGGTGCCGCAACGATCGCCGAAGTGAAGACCCGCATCATCAAGGGCGAAGAGAAGGTCTATCTCAAACTCCGTGTGACCCAAGGCGACCTGACGATCGAGGTTCCGGCGGACAACGTCGACCTCGTCGGCGTTCGCGACGTCATCGGCAAAGAGGGACTCGAGCGCGTCTTCGAGGTGCTCCGGGCGCCGTTCACCGAGGAGCCCACGAACTGGTCGCGCCGGTACAAGGCCAACCTGGAGAAGCTCGCGTCGGGCGATGTGATCAAGGTCAGCGAGGTCGTGCGCGATCTGTGGCGCCGTGACCAGGACCGCGGCCTGTCGGCCGGTGAGAAGCGCATGCTGGCGAAGGCTCGTCAGATCCTCATCTCCGAGCTCGCGCTGGCCGAGAAGACCGACGAGGAGCAGGCCGGCGTCGTGCTCGACGAGGTCCTGGCGTCCTGA
PROTEIN sequence
Length: 161
MLFEVGETVVYPHHGAATIAEVKTRIIKGEEKVYLKLRVTQGDLTIEVPADNVDLVGVRDVIGKEGLERVFEVLRAPFTEEPTNWSRRYKANLEKLASGDVIKVSEVVRDLWRRDQDRGLSAGEKRMLAKARQILISELALAEKTDEEQAGVVLDEVLAS*