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SCN18_13_7_16_R2_B_scaffold_25467_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 1..426

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 137.0
  • Bit_score: 236
  • Evalue 2.10e-59
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731035 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 138.0
  • Bit_score: 236
  • Evalue 1.10e-59
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 135.0
  • Bit_score: 218
  • Evalue 1.20e-54

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
CCCGCGTTCGACGACCGTGCGCACCACCGCGCCCTCTTGCGCAAGGCATCCGCGATCAAGCGGGTCCTCCTCGACCAGACGGTCCTCAGCGGCATCGGCAACATCTACGCCGACGAGGCACTGTGGGCGGCCCGCATCCACCCCGAGACGCCCGCCCGCGCGCTGTCCTCGCGTGCATCGCGCCGGCTGCTCCTGGAGGTCCGCGCCGTGCTGGAGCGCGCTCTCGCCGAGGGCGGCACGAGCTTCGACGCCCAGTACGTCAACGTGAACGGGCAGGCCGGGTACTTCGCCCACTCTCTGAACGCCTACGGACGGACCGGCGAGCCATGTGCCCGGTGCGGCCGACCCATCGTGCGGGTGTCGTTCATGAACAGGTCGAGCCACTACTGCCCGCACTGCCAGCGAGGGCCGCGCGCGACCGCCTGA
PROTEIN sequence
Length: 142
PAFDDRAHHRALLRKASAIKRVLLDQTVLSGIGNIYADEALWAARIHPETPARALSSRASRRLLLEVRAVLERALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGEPCARCGRPIVRVSFMNRSSHYCPHCQRGPRATA*