ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1223_9

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9380..11722

Top 3 Functional Annotations

Value Algorithm Source
Rubisco activation protein CbbO id=1331602 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 785.0
  • Bit_score: 1407
  • Evalue 0.0
cbbO1; rubisco activation protein CbbO similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 785.0
  • Bit_score: 1367
  • Evalue 0.0
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 785.0
  • Bit_score: 1407
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2343
ATGTCGATCAAACTCGAAGACTACGCTGAACTGCTGGAAGACCTGTCGCCGCATACGCGCGATGTGCTCGAAGCCGCCTGGCACGAGGCGGCCAAGACGTTCTCGCCGCGCGGCCTGGACAACTACCTGAAGGGGGTATCGGCCATCCGCGGTTTGGGCCGCGGCGATGCCCTGGTGGAAACCTGGATCGAGCGGGCGCCGATGGTGGCGAGGGAAGTGGGCGAGGATGTGCTGGCCGATCTGGCGACCGCTTCGCTGATGCTGGCGTCGAAGACCTCGGGCGCGGTGATCGAGCTGCTGCTGGCCAGTGCGCCCACGGCGGCCAGCCGGCTGGGCGATGCAAACCTGTTCCTCAAGTATCTGCAGTTCATCAACACCCTGATCGCACAGGCGCCACGCGGCGTGCGCCCGATGCTCGACAAGCTGGAAGTCCTGCTCCAGCATCTGACGCTGGGCGGTTTGCGGCGCTGGGCCTTGTGGGGGGCGCACGCGCACCGCACCAACTATGAAGAGCAGATCAGGTATTTCGGTCTCGAATCGAAAGAATCGCTGGCGATGCTGCAGAAGGAGCGCAAAGGCACGCTGCTGGTCGACGTGCAGCGGCGCATCAACATGTATCTGCGCGCATTGTGGGCGCGCGATTTCTTCATGCGCCCGACCTCGGGCGATTTCGAGGCGCGCGAAGGCTATCGGCCGTACATTGAAGATTATCTGCTGCATCTTCCCGATGCGTTCGACGACTTCGTCGTCGAAGGTCAGGACCCCGTGTCCGGCCTCGAGTTGTATCGGGCCACCGCGGCGCACTGTGCCGCGCACATCGTTGAAACACGGCAGCCGATTTCCGCCGAAGCGCTGAATCCCCTGCAGATGGCGGTGATCTCGGTCATCGAGGATGCGCGCGTGGAGACACTGGCCATTCGCCGTTTTCCCGGCCTGAAACAGCTTTGGTGCAAACTGCATACCGCCACCCCCGCGTTGAACAGGACGCTGGGCGACTTCCTCAACCGGCTGGCGCGCGCGCTGCTGGATGAGACCTACGGAGATGACGATCCGTGGATTGACGAAGGGCGCAGACTGTTTGCGGAGGCGCAATCCGCGCTGGACGTCAACCAGACTTCGTGGGAAATCGGCGTACAGCTCGCACACGGCCTGCAGCAGAAAAAAATCCCGTTCAGTCTTCGCACGGATCTCCTGACCGCGCCCTACCGTGACGACAATCGCTATTTCTGGGAGTTTGAGGAATTCGATTTCGACAAGGCGGCCAATGCGGGATTCGACACCGTCAAACAGGAACGCAAATACGTGAGCGTGATGGAGATGGCCAACGAGGTTGAAGTCGAGACGGCCGGCGACGATGCCGAGGAAATCTGGGTGCTGAACACCGAGCTCTATCCCTATGAGGATATGGGAATCAGCTACAACGAGATGGAAGGCAAGGAGCCCCTGTCCGAGCCCTTTCATTATTCCGAATGGGATTACCAGATCCAGCTTGAGCGCCCGTTCTGGGCGACCGTACAGGAAAAGCGCCCGAAATCGGGCGATCTGGATGTGATCGACCAGATCACGGCCCAGTACAAGCGTGAAATCCACCGCATGAAATTCCTGCTTGACGCGATGCAGCCGCAGGGCGTGCAACGCATCCGCAAGCTGGAAGACGGGGACGAGATCGACATCAACGCGGCGATTGCCAGCTTTATCGACATCCGCATGGGCAGTCAGCCCGATCCGCGCATCATGATGCGATCGGTCAGAAAAACCCGCGATTTCTCGATACTGGTCTTGCTGGACCTGTCGGAATCCACCAACGAAACCGTGCAGGACCAGGAATACTCGGTACTTGAGCTCACGCGCCAGGCCTGCGTGCTGCTGGCCGACGCGATCAGCAAGGTCGGTGACCCCTTCGCGATCCATGGTTTTTGCTCCGATGGGCGTCATGATGTGGAGTACTACCGCTTCAAGGACTTCGACCAGCACTGGGACGAAGTGCCGAAAGCGCGGCTCGCGGGCATGACCGGCCAGCTCTCGACCCGCATGGGCGCGGCCATCCGTCACGCCGGCCATCATCTGAAATTGCAGCGCTCGGCGAAAAAACTGCTCATCGTCATCACCGACGGCGAACCGGCCGACATCGACGTACGCGACCCGCAGTACCTGCGCTACGACGCCAAGAAAGCGGTGGAGGAGGTCGGCCGCGACGGGGTCATCACCTACTGCATGAGCCTCGATCCTCGCGCCGACAACTATATGTCGCGCATTTTCGGGCAGCGCAACTACATGGTGGTGGATCACGTGCAGCGATTGCCGGAGAAATTACCCGTGCTGTATGCCGGCCTGACCCGCTAA
PROTEIN sequence
Length: 781
MSIKLEDYAELLEDLSPHTRDVLEAAWHEAAKTFSPRGLDNYLKGVSAIRGLGRGDALVETWIERAPMVAREVGEDVLADLATASLMLASKTSGAVIELLLASAPTAASRLGDANLFLKYLQFINTLIAQAPRGVRPMLDKLEVLLQHLTLGGLRRWALWGAHAHRTNYEEQIRYFGLESKESLAMLQKERKGTLLVDVQRRINMYLRALWARDFFMRPTSGDFEAREGYRPYIEDYLLHLPDAFDDFVVEGQDPVSGLELYRATAAHCAAHIVETRQPISAEALNPLQMAVISVIEDARVETLAIRRFPGLKQLWCKLHTATPALNRTLGDFLNRLARALLDETYGDDDPWIDEGRRLFAEAQSALDVNQTSWEIGVQLAHGLQQKKIPFSLRTDLLTAPYRDDNRYFWEFEEFDFDKAANAGFDTVKQERKYVSVMEMANEVEVETAGDDAEEIWVLNTELYPYEDMGISYNEMEGKEPLSEPFHYSEWDYQIQLERPFWATVQEKRPKSGDLDVIDQITAQYKREIHRMKFLLDAMQPQGVQRIRKLEDGDEIDINAAIASFIDIRMGSQPDPRIMMRSVRKTRDFSILVLLDLSESTNETVQDQEYSVLELTRQACVLLADAISKVGDPFAIHGFCSDGRHDVEYYRFKDFDQHWDEVPKARLAGMTGQLSTRMGAAIRHAGHHLKLQRSAKKLLIVITDGEPADIDVRDPQYLRYDAKKAVEEVGRDGVITYCMSLDPRADNYMSRIFGQRNYMVVDHVQRLPEKLPVLYAGLTR*