ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1223_10

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 12043..12867

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase id=12494909 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 555
  • Evalue 1.60e-155
spermidine synthase similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 265.0
  • Bit_score: 349
  • Evalue 8.60e-94
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 276.0
  • Bit_score: 419
  • Evalue 2.00e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGTATCGGGCGAACCGGTCAAGGTCCTGGTGCGCGAACCGGCCGAAGCCGATCCCCTGTGGGTGTATGACCGGATTGTTGCCGGTCGTTACGAGCGGCCTTTCATCATCGACGATGGCCAGACCCGGCAGCTGTTTTTCAATCTGGATTTCATCCAGAGTTCCATGCGCCTCGACGATCCCTTCACTCTCGATTGCGCCTATACCCGAAAAATGATGGCTTTTCTGCTTTTCGTTCCGGACCCCGGGCGGGTGCTGATGATCGGTCTGGGAGGCGGTTCGCTGGCCAAATTCTGCTACCGCCATCTGCCGCGGGCACGTCTGACCGTCGTGGAGGTGAATCCCGACGTCATCGCCATGCGCGGCGCGTTCAAGGTTCCCGAAGATGAGCGCCTGGCGATTGTCGAGGCCGATGCGGTCGATTACCTGCCCACCACGGAGGGCGATACCGATGTGCTGCTGCTCGATGGCTTCGACGCCCGCGGCATCGCGCCACGCTTTCTCGATCGGGCCTTCTACCGGGCAGCGCAGCGGCGGCTCAGGCCGGGAGGCGTGCTCGTCGCCAACTTTGCCGGCACGAGGAAACGCTGGTCCAGGCATCTGGATCTCCTCAACGAGGTGTTCGAAGGACGTGTGCGGATGGGAACGGTTCCTGGCGGCGACAATCATATTGCCTTTGCCGAAGCATGCCGTCCGCTGGATTGGGAGCGTCTGGAGGAACGGGCGGATGCGCTTGCCGAGCGTTTTCCGCTGGATTTTTCCGCGCTCGTGCGCAGTCTGCGCCAAGGCGCCGGATTAAGCTGGGCGAAAGCGGGCTGCCGTTAA
PROTEIN sequence
Length: 275
MVSGEPVKVLVREPAEADPLWVYDRIVAGRYERPFIIDDGQTRQLFFNLDFIQSSMRLDDPFTLDCAYTRKMMAFLLFVPDPGRVLMIGLGGGSLAKFCYRHLPRARLTVVEVNPDVIAMRGAFKVPEDERLAIVEADAVDYLPTTEGDTDVLLLDGFDARGIAPRFLDRAFYRAAQRRLRPGGVLVANFAGTRKRWSRHLDLLNEVFEGRVRMGTVPGGDNHIAFAEACRPLDWERLEERADALAERFPLDFSALVRSLRQGAGLSWAKAGCR*