ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1426_17

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7003..7398

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=12495309 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 254
  • Evalue 3.70e-65
30S ribosomal protein S8 similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 131.0
  • Bit_score: 235
  • Evalue 6.70e-60
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 131.0
  • Bit_score: 249
  • Evalue 1.70e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGAGTATGAGTGATCCCATCGCGGATATGCTGACCCGAATCCGCAATGCGCAGGCGGTCGAGAAAGCGGCTGTCACGATGCCGTCTTCGAAGGTGAAGGTGTCGATTGCCAAGGTTCTGAAAGACGAAGGCTACATCGATGATTTCGCCGTTCGTGGCGAAGCGGGCAAGCCTGAACTTGAGTTGCAATTGAAATATCATGCGGGCCGCCCGGTGATCGAACGCATCGAGCGCGTCAGCAAGCCTGGCCTGCGCATCTACAAGGGTGCCGAGGATTTGCCGCGCGTCATGAATGGCCTGGGTGTCGCAATAGTGTCCACTTCAAGCGGTGTGATGACTGACCGCCACGCACGGGCCAAGGGCGTGGGCGGTGAAGTGTTGTGCGTGGTCGCGTAA
PROTEIN sequence
Length: 132
MSMSDPIADMLTRIRNAQAVEKAAVTMPSSKVKVSIAKVLKDEGYIDDFAVRGEAGKPELELQLKYHAGRPVIERIERVSKPGLRIYKGAEDLPRVMNGLGVAIVSTSSGVMTDRHARAKGVGGEVLCVVA*