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SCN18_10_11_15_R3_B_scaffold_1426_18

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7411..7941

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12495308 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 176.0
  • Bit_score: 334
  • Evalue 6.50e-89
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 176.0
  • Bit_score: 310
  • Evalue 2.20e-82
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 315
  • Evalue 2.60e-83

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCACGTGTAGCCAATAATCCCATTACGTTGCCGAAAGGTGTGGAAGTCACGCTGGAAGGCGGCATTTCCGTCAAGGGGCCGTTGGGCTCCCTGAGACAGGCCGCGTCACCCAATGTGGCCGTTGCGCTCAATGAAGGCGTGATGACGTTCGCCCCCGTGGATGCAAGCATTCAGGCGAACGCCATGGCGGGAACCCTGCGTGCGCTGGTGAGCAATATGGTGCAGGGGGTTTCCAGGGGGTTCGAGAAGAAGCTGACGCTGGTCGGCGTCGGCTATCGCGCTCAAGCCCAGGGCGACGCCCTCAACCTGACACTTGGGTTCTCGCATCCGGTCGTCCATAAAATGCCTGCGGGCATCAAGGTCGAGACCCCGACCCAGACCGAGATTGTGATCAAGGGCATTGATCGCCAGGCGGTTGGCCAGGTGGCCGCCGACGTGCGCGCCTACCGTCCGCCGGAGCCTTACAAAGGCAAGGGCGTGCGCTATAGCGACGAAGTGGTCATCAAGAAAGAGACCAAGAAGAAGTAA
PROTEIN sequence
Length: 177
MSRVANNPITLPKGVEVTLEGGISVKGPLGSLRQAASPNVAVALNEGVMTFAPVDASIQANAMAGTLRALVSNMVQGVSRGFEKKLTLVGVGYRAQAQGDALNLTLGFSHPVVHKMPAGIKVETPTQTEIVIKGIDRQAVGQVAADVRAYRPPEPYKGKGVRYSDEVVIKKETKKK*