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SCN18_10_11_15_R3_B_scaffold_1426_28

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 12041..12670

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 209.0
  • Bit_score: 417
  • Evalue 7.00e-114
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 209.0
  • Bit_score: 396
  • Evalue 3.60e-108
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 209.0
  • Bit_score: 404
  • Evalue 5.00e-110

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGCTCGTAATCTTGATCCCAAATGCCGCCAGTGCCGTCGTGAGGGCGAAAAGCTCTTTCTGAAAGGTGAGAAGTGCTTTACCGACAAATGTGCGATTGAACGTCGCGCCTACGCGCCTGGCCAGCATGGCCAGAAAAGCGGCGCGCGTCTGTCCGGTTATGGCGTGCAGCTGCGTGAGAAGCAGAAAATCCGCCGTATCTACGGCGTTCTGGAAGGCCAGTTTCGCCTGACCTACAAACGCGCGGAAGGCCGCAAGGGCGTAACCGGCGAAAACCTGCTGTCCATGCTGGAATCGCGTCTGGATTCGGTGTGTTACCGCATGGGCTTTGGCGCGTCGCGCACCGAGGCGCGTCAGGTGGTCCGCCACAACGGCATCAACGTGAACGGCCGTCGCGTCAATATCCCATCCTATCAGGTGCGCGCAGGAGATGTGGTCGAGGTAATCGACAAGGCGAAAGCCCATCTGCGCATCAAGGCGGCCGCGGAAGCGACGGCCGCACGTGGATACCCGGAGTGGATCGAAGTCGATGCCAAGGCGCTCAAGGGCACCTACAAGGCTGCGCCGCAACGTTCGGAACTGCCGTCGACCATCAATGAGTCGCTGGTCGTCGAGTTGTACTCCAAATAA
PROTEIN sequence
Length: 210
MARNLDPKCRQCRREGEKLFLKGEKCFTDKCAIERRAYAPGQHGQKSGARLSGYGVQLREKQKIRRIYGVLEGQFRLTYKRAEGRKGVTGENLLSMLESRLDSVCYRMGFGASRTEARQVVRHNGINVNGRRVNIPSYQVRAGDVVEVIDKAKAHLRIKAAAEATAARGYPEWIEVDAKALKGTYKAAPQRSELPSTINESLVVELYSK*