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SCN18_10_11_15_R3_B_scaffold_1298_29

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(26966..28441)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12493632 bin=THIO_HI species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 491.0
  • Bit_score: 1001
  • Evalue 2.60e-289
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 4.10e-272
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 2.00e-271

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGGCATCGCAAACTATCAAGGAAGGCAAGGAACGTTACAAGTCGGGTGTGATTCCGTACAAGAAGATGGGCTACTGGGAACCGGATTACAAGCCCAAGGATACTGACGTGATCGCGCTGTTCCGCATCACCCCGCAGGAAGGCGTCGACCCCGAAGAAGCCGCTGCCGCCGTCGCGGGAGAATCGTCGACCGCGACGTGGACGGTGGTGTGGACCGACCGCCTGACCGCCTGCGAGCTTTATCGCGCCAAGGCGTATCGCGTGGATCCTGTCCCCAATACCGGTGCCGGCACCAAGAACGAAGCGCAGTATTTCGCCTACATCGCCTATGACCTCGACCTCTTCGAGCCGGGTTCGATCGCCAACCTGACCGCGTCGATCATCGGCAACGTGTTCGGCTTCAAGGCGGTGAAGGCACTGCGCCTCGAAGACATGCGCATTCCCGTCGCCTATCTGAAGACCTTCCAGGGCCCGGCAACCGGCATCGTGGTCGAGCGCGAGCGCCTCGACAAATTCGGCCGCCCCCTGCTGGGCGCCACCACCAAACCCAAGCTCGGCCTGTCGGGCCGCAACTACGGCCGCGTGGTGTACGAAGCATTGAAAGGCGGCCTCGACTTCGTGAAGGACGACGAGAACATCAACTCGCAGCCCTTCATGCACTGGCGCGACCGTTTCCTGTATTGCATGGAAGCGGTGAACAAGGCCTCGGCCGCTACCGGCGAGGTCAAGGGCCATTACCTCAACGTCACCGCCGGCACCATGGAGGAGATGTACGAACGCGCCGAATTCGCCAGGAACCTGGGATCGGTGATTGTCATGATCGATCTGGTCATCGGCTATACCGCGATCCAGAGCATGGCGAAATGGGCGCGCAAGAACGACATGATCCTGCACCTGCACCGCGCCGGAAACTCGACCTACTCACGCCAGAAGAATCACGGCATGAATTTCCGCGTGATCTGCAAATGGATGCGCATGGCGGGCGTCGATCACATTCATGCCGGCACCGTCGTGGGCAAGCTCGAGGGCGATCCGCTGATGATCAAGGGCTTCTATGACACCCTGCGGGACACGCATACGCCGATGAGCCTGGAAAACGGCCTGTTCTTCGACCAGGACTGGGCTTCGCTCAACAAGGTCATGCCGGTCGCTTCCGGCGGCATTCACGCAGGCCAGATGCACCAGTTGCTGACCTATCTCGGCGAAGACGTGATCCTGCAGTTCGGCGGCGGCACCATCGGCCACCCGCAGGGTATCCAGGCCGGCGCCACGGCGAACCGCGTGGCACTTGAAGCGATGGTGATGGCGCGCAACGAGGGCCGCGACATCTGGAACGAAGGGCCGCAGATTCTGGAGGCCGCAGCCAAATGGTGCACGCCGCTCAGGGCTGCCCTCGACACGTGGAAGGACATCACCTTCAACTACGCGTCGACCGATACCGCCGATTTTGTGCCCACCGCCACGGCCAGCGTTTGA
PROTEIN sequence
Length: 492
MASQTIKEGKERYKSGVIPYKKMGYWEPDYKPKDTDVIALFRITPQEGVDPEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYRVDPVPNTGAGTKNEAQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIVVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEALKGGLDFVKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVKGHYLNVTAGTMEEMYERAEFARNLGSVIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDTHTPMSLENGLFFDQDWASLNKVMPVASGGIHAGQMHQLLTYLGEDVILQFGGGTIGHPQGIQAGATANRVALEAMVMARNEGRDIWNEGPQILEAAAKWCTPLRAALDTWKDITFNYASTDTADFVPTATASV*