ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1571_26

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 27985..29772

Top 3 Functional Annotations

Value Algorithm Source
ATPase, type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=12494607 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 541.0
  • Bit_score: 1063
  • Evalue 0.0
ATPase, type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 561.0
  • Bit_score: 1000
  • Evalue 1.20e-289
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 561.0
  • Bit_score: 1030
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
ATGTCCCGCAGGGACGGTATCCCTTGGGACACAGAGGAAACCACCCGGGTCAGGGTTTTCTCCGTGCCTCTGTGCCTCTGTGGTCAAGGGTTTTTAAGCATGGAGCGCCGCAAGAAACTCCGCATGGGCGAAACCCTGGTCACCCAGGGTCTGATTACGCTCGACCAGTTGCGCATCGGTCTCAAGGAGCAAAAATCCACCGGCCTGCCGATCGGCCGCCAGCTGGTCGCGCTCGGTTTCATCACCGAGGCCGTGCTGCGCGACCAGCTCGCCAACGCGCTCGGCAGCCAGGGCATCGACCTTACCCAGGTGGTGGCCGACCCCGAGGCGCTGCAACTGGTGCCGGAGGAATTCGCGCGCCGCCATCATCTGCTGCCGATCGCCCACGACGCCGCGCGCAACGTGCTGACGCTGGCGACCACCGACATGTTCAACGTCGTCGCACTCGACCAGTTGAAAGCCTCGCTCGGCGGCCAGATCGAAATCGATACCCTGCTGGCGGCCGAAGCGCAGCTGCTCGAATGCATCGACAAGTTCTACGGCTTCGACCTCTCGCTCGACGGCATCCTGCGCGAGATCGAGACCGGCGAGGTCGATTACGCCAGCCTCAACCCCGACACCGAGGAGTACACCCAGCCCGTGGTGCGGCTGGTCGGCGCACTGCTGACCGATGCGGTGAAACGCGAATCCTCCGACATCCACTTCGAGCCCGAGCACGCCTTCCTGCGCATCCGCTACCGCATCGACGGCGTGCTGGAACAGATCCGCAGCCTGCACAAGACCTACTGGCCCGGCATCCTGGTGCGGCTGAAAGTGCTCTCCGGCATGAACATCGCGGAGACGCGCGCGCCGCAGGACGGCCGCATGTCCTTGACGCTGAACGGCCGCCCGATCGATTTTCGCGTCTCCAGTCAGCCCGGCATCCACGGCGAGAACGTGGTGCTGCGCATCCTCGACCGCGAGAAATCCATCATGCCGCTGGATTACATGGGCTTCACACCCGACGCGCTGCGCGAACTGCAGCTGATGATGGCGCGCCCCGAAGGCATCCTGGTCGTCACCGGTCCCACGGGTTCAGGGAAAACCACCACGCTGTACTCGATGCTCTCGCATCTCAACAACGAGACCGTCAACATCATGACGCTGGAGGATCCAGTCGAATACCCGGTCACCCTGATGCGTCAGAGCTCGGTCAACGAAACGCTCAAGCTCGATTTCGCCAACGGCATCCGCTCGATCATGCGGCAGGACCCGGACATCATCCTGGTCGGCGAAATCCGCGACAAGGACACCGCCGAAATGGCCTTCCGCGCCGCCATGACCGGCCACCAGGTGTTCACCACCCTGCACACCAACTCCGCCCTCGGCGTGTTCCCGCGCCTGATGGACATCGGCATCCAGCCCGGCATCCTGTCGGGCAATATCATCGGCGTCATCGCCCAGCGCCTGGTGCGCAAGCTGTGTTCGCACTGCCGGGAAGCCTATACGCCGGACGCGGACGAGGCGCGCATCCTCGGCGTCGATCCCGCCCAGCCGCCGCAGATCTATCGACCCGTCGGCTGCCCGCGCTGCAGCAACAAGGGCTACAAAGGCCGGCTGGCGCTGATCGAGCTGCTGCGGATGGACCCGACGCTGGACGAACTCGTCGCCAACCATGCGCCGCTGCACGAAGTCCGACGCGCCGCATTCGAGCATGGCTATCACCCGCTGGCCGAAGATTCAGGAATCAGAAATCAGGGATCAGAAATCAGTCCCTGTGCCGCTGCGCGGCGTAAATCCGATCCCTGA
PROTEIN sequence
Length: 596
MSRRDGIPWDTEETTRVRVFSVPLCLCGQGFLSMERRKKLRMGETLVTQGLITLDQLRIGLKEQKSTGLPIGRQLVALGFITEAVLRDQLANALGSQGIDLTQVVADPEALQLVPEEFARRHHLLPIAHDAARNVLTLATTDMFNVVALDQLKASLGGQIEIDTLLAAEAQLLECIDKFYGFDLSLDGILREIETGEVDYASLNPDTEEYTQPVVRLVGALLTDAVKRESSDIHFEPEHAFLRIRYRIDGVLEQIRSLHKTYWPGILVRLKVLSGMNIAETRAPQDGRMSLTLNGRPIDFRVSSQPGIHGENVVLRILDREKSIMPLDYMGFTPDALRELQLMMARPEGILVVTGPTGSGKTTTLYSMLSHLNNETVNIMTLEDPVEYPVTLMRQSSVNETLKLDFANGIRSIMRQDPDIILVGEIRDKDTAEMAFRAAMTGHQVFTTLHTNSALGVFPRLMDIGIQPGILSGNIIGVIAQRLVRKLCSHCREAYTPDADEARILGVDPAQPPQIYRPVGCPRCSNKGYKGRLALIELLRMDPTLDELVANHAPLHEVRRAAFEHGYHPLAEDSGIRNQGSEISPCAAARRKSDP*