ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1571_27

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 29813..30235

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=12494606 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 132.0
  • Bit_score: 258
  • Evalue 2.10e-66
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 132.0
  • Bit_score: 249
  • Evalue 4.80e-64
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 132.0
  • Bit_score: 251
  • Evalue 6.20e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGCCCTTCTTCGACTACCGCGCCATCGACCAGACCGGCCGCACCGTCCGCGGCACGCTGTCGGCCGTCAACGACGTCGATCTCGAACTGCGGCTGAAACGCATGGGGCTCGACCTCGTCACACTGGTCGAGCTGTCGCGCCAATACGCCCCGACCGGCCGCGAACGCGTGACACGGCGCGATCTGGTGACGTTCTGCATCCACATGCGCTACATCACCCGCGCCGGGATTCCGCTGCTCGAAGGGCTGCGCGATCTGCGCGACACCATGGAGAAACGTGGATTCCGCGATGTGCTGACCGCGCTGCTGGAAGACCTGGAAGGCGGCAAGGTGCTGTCGCAGGCGCTGGCGGCGCACCCGGCGGTATTCGGCGCCGTGTTCGTGCACAGCGTCAAGAGGTTGCCGCCAAGGCCAAGCGCCTGA
PROTEIN sequence
Length: 141
MPFFDYRAIDQTGRTVRGTLSAVNDVDLELRLKRMGLDLVTLVELSRQYAPTGRERVTRRDLVTFCIHMRYITRAGIPLLEGLRDLRDTMEKRGFRDVLTALLEDLEGGKVLSQALAAHPAVFGAVFVHSVKRLPPRPSA*