ggKbase home page

SCN18_10_11_15_R3_B_scaffold_1660_14

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(17550..18101)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] id=12493059 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 363
  • Evalue 1.00e-97
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 174.0
  • Bit_score: 299
  • Evalue 5.20e-79
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 183.0
  • Bit_score: 313
  • Evalue 1.30e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGCAAGCGAGACAATCTATACCTCGTCGGATTGATGGGAGCCGGGAAGACCACCGTGGGGCGGCTGTTGGCCAAGCATTATGGGTGTGTCTTTTACGACTCGGACCACGAGATCGAGGCGCGTACCGGCGTGAAGATTCCGGTCATCTTCGAAATCGAGGGCGAGGCGGGTTTCCGCAAACGCGAAGAGGCGGCGATCGCCGATCTGACCGGCTTGTCCGGCATCGTCCTGGCGACGGGAGGCGGGGCGGTTCTCTCGGCGGCCAATCGCGACAGGCTGAAGAAAAACGGGGTGGTGATTTATTTGCGCGGCACCCCCGAGCACCTGCATGAGCGCACGCGGCACGACCGCAACCGTCCTTTGTTGCAGACCGAGAATCCGCTCGCCAGGCTGCGCGAGCTGTTCAGGCAGCGTGACCCGTTGTACCGCGACGTGGCGGACATCGTGGTGGATACCGGCCGGCAGAGCGTGGCCGGCATGACCCGTGTGCTGTATGGCAAGCTGGACCTGCTTAAAAGCGGGCTGCCGTTGCCGGCTTCGGCGGACTGA
PROTEIN sequence
Length: 184
MSKRDNLYLVGLMGAGKTTVGRLLAKHYGCVFYDSDHEIEARTGVKIPVIFEIEGEAGFRKREEAAIADLTGLSGIVLATGGGAVLSAANRDRLKKNGVVIYLRGTPEHLHERTRHDRNRPLLQTENPLARLRELFRQRDPLYRDVADIVVDTGRQSVAGMTRVLYGKLDLLKSGLPLPASAD*