ggKbase home page

SCN18_10_11_15_R3_B_scaffold_2261_6

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5691..6341)

Top 3 Functional Annotations

Value Algorithm Source
outer membrane protein id=12495461 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 3.70e-118
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 196.0
  • Bit_score: 148
  • Evalue 1.80e-33
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 219.0
  • Bit_score: 382
  • Evalue 2.80e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
TTGCGCACCTCTTTATTTGTCAGCACCCTCGGAGCCATCCTGATGTCTGCCAGCGTTGTAACGGCCTACGCGGCAGGAGGCGTTTACTACGATCCTTCCAATGCTGCCAGCCCCACCGGAAAAACGACCGGCTACGAGCTTTACCGGACGATCGGCTGTCCGGGCCGCGGACTTTTGGATACCCCTTGCGCGGTCCCTGCACCGCCGGCACCGGTTGCGGCGGCTGAACCCGCACCGGCCCCCGAACCGGCCTATGTCGCACCGCCCGCGCCCGCGCCGGCCCCCTACGTCGCACCCGCACCCGCGCCCCCGCAGAAACTGGAACTGGAAGGCGTGAATTTTGATTTCGACAAGGCCACGCTGCGCCAGGAAGATATCGCCATCATCGACAAGAATGTCGCCGGGCTGGATAAATGGGGCAATGTGAACATCGAAGTCGCGGGCCACACAGACAGCCGGGGCAGTGAGCAATACAACATGAAGCTGTCCCAGCGGCGCGCAGAGACCGTTCGCAACTACCTGATCAGCAAGGGCATCGCCGCGGACCGCCTGACTGCCAAGGGCTACGGAGAATCCCAGCCGATCGCCGACAATGCGACGGAAGAAGGACGCTTCAAGAATCGTCGTGTCGAACTGATCGAAAAACGCTGA
PROTEIN sequence
Length: 217
LRTSLFVSTLGAILMSASVVTAYAAGGVYYDPSNAASPTGKTTGYELYRTIGCPGRGLLDTPCAVPAPPAPVAAAEPAPAPEPAYVAPPAPAPAPYVAPAPAPPQKLELEGVNFDFDKATLRQEDIAIIDKNVAGLDKWGNVNIEVAGHTDSRGSEQYNMKLSQRRAETVRNYLISKGIAADRLTAKGYGESQPIADNATEEGRFKNRRVELIEKR*