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SCN18_10_11_15_R3_B_scaffold_1398_23

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22571..23119)

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493479 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 362
  • Evalue 2.30e-97
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 182.0
  • Bit_score: 274
  • Evalue 1.40e-71
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 182.0
  • Bit_score: 330
  • Evalue 1.40e-87

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTCAGCCGCCTTCTTTTTGGCCCGTCTCGCCCAGGTATCGAAGCCTTGCGCCCGCTGCTCTACCGGATCGCCTTCGCCTGGTGCCATGATGCCGCGCTGGCGGACGATCTGGTTCAGGAAGCGCTCTCCAAGGGGTGGAAGCGGCGCGCCCAGTTGCGCGACGAGGCCGCGCTGAAGGCATGGATGGTATCGATCATGAACCACTGCTGGCTCGATCACTTGCGCAGCCGGCGCGACTTCGACGACATCGAGGACTGGCAGGACGAACTTGAGTCTGCCGCCGATGCCCCCGAGGTGCGCTGCGATCGCGAGCGGGTGATCGCCTGCGTGCGCGAGGCCGTGGCGCGCCTGCCGTTGGGCCAGCGCCAGGTGCTGACGCTGGTCGACCTGGAGGAATTCAGTTATGCCGACGTGGCTGCGATCCTGGACATCCCGGTCGGTACCGTGATGAGCCGCCTGTCGCGTGCGCGCGCATCCCTGAAAAGTCTGCTGAACCCCGCGCTGCAACAGTCGGCGGTGCAGCCGCTGCTGAGGAGGGTCAAATGA
PROTEIN sequence
Length: 183
MLSRLLFGPSRPGIEALRPLLYRIAFAWCHDAALADDLVQEALSKGWKRRAQLRDEAALKAWMVSIMNHCWLDHLRSRRDFDDIEDWQDELESAADAPEVRCDRERVIACVREAVARLPLGQRQVLTLVDLEEFSYADVAAILDIPVGTVMSRLSRARASLKSLLNPALQQSAVQPLLRRVK*