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SCN18_10_11_15_R3_B_scaffold_1739_15

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11810..12820)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12495473 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 287.0
  • Bit_score: 559
  • Evalue 1.40e-156
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 285.0
  • Bit_score: 432
  • Evalue 9.50e-119
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 285.0
  • Bit_score: 432
  • Evalue 4.70e-118

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGCCCAAATCGATCATCGACGGCGTGCTGCTGCTGAACAAGCCGGTCGGCATCACCTCCAACGCCGCGCTGCAGAAAGCCAAGTGGCTGCTCAACGCGAAAAAGGCGGGCCACACCGGCACCCTCGATCCCTTCGCCGACGGCCTGCTGCCGCTGTGTTTCGGCGAGGCCACCAAGTTCTCGGCCTACCTGCTGGATGCGGACAAACACTATCGCGCGGTGCTGCAGCTCGGCACCACCACCACCACCGGCGACCCGGAAGGCGAGGTGCTCGACACCCGCGAGGTGGCGCTCAGCCGTGACGACATTGCCGCCGTGCTGCCGCGCTTCATGGGCGAAATCGAGCAGATTCCGCCGATGCATTCCGCGCTCAAGCACCAGGGGCATCCACTCTACGAATACGCGCGCGCCGGCATCGAGATCGAGCGCCCGCCCCGCAAGGTCACGATCCGCGCACTCGAACTGATCGAATGCGCCCCGCCGCGCGTGGTGCTGGATGTGCAATGCAGCGCCGGCACCTATATCCGCACCCTGGCGCAGGACATTGGCGCCGCGCTCGGCTGCGGCGCCCACCTCACCGCGCTGCAACGCACGGCAGCGGGCGGATTCAGCCTGGAGCAGGCGCATACGCTGGCCGAACTGGAAACGCTCGACCCCGTCCGGCGTATCGCCCTCCTGCAGCCGGCGGACTGCCTGGTGTCCCACCTGCCGGCGCTGCATCTCGACGACGCCAGCACGACAGCGCTGTGCCAGGGGCGCAGCGTGCCATATTCCGGCAATCATGCGGGACTGGTGCGCCTGTATACGGCCGCAAACCGCTTTCTCGGCCTGGCCCAGGCCGACGCCGGCCAGCTGGTCCCCCCCGCCGTCTGCTCGCCACACAACAAGCTTGAGTCGCCCCACCCTTTCCGCGTAAAATGCGCGGTTTCCCCCGAACGTGTCCCGCACAGCCGCAGGCCACGCGATTCAGAAGGAGTACACCATGGCTGTTACCGTCGCCCAAAAGGCTGA
PROTEIN sequence
Length: 337
MPKSIIDGVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLDADKHYRAVLQLGTTTTTGDPEGEVLDTREVALSRDDIAAVLPRFMGEIEQIPPMHSALKHQGHPLYEYARAGIEIERPPRKVTIRALELIECAPPRVVLDVQCSAGTYIRTLAQDIGAALGCGAHLTALQRTAAGGFSLEQAHTLAELETLDPVRRIALLQPADCLVSHLPALHLDDASTTALCQGRSVPYSGNHAGLVRLYTAANRFLGLAQADAGQLVPPAVCSPHNKLESPHPFRVKCAVSPERVPHSRRPRDSEGVHHGCYRRPKG*