ggKbase home page

SCN18_10_11_15_R3_B_scaffold_3070_9

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7989..8231

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis/type III secretory pathway lipoprotein FliF; K02409 flagellar M-ring protein FliF id=12494972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 81.0
  • Bit_score: 157
  • Evalue 2.90e-36
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 83.0
  • Bit_score: 75
  • Evalue 2.00e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ATGCCGCCGGCCAGCCAACCGCCGGCGACGCCCCGGATCGTTGATTTCCAGCCCTGGATGCTGGCCGCGCTCGGGGGCGGACTTCTGCTCATCGGGCTGGCCGTCTGGCGGCGCCCGCGGCCTGCGGCGGCCGTCGAGCCGCCGGTCGTGGACCTCGATGCCGAACTCGAGGTCACGCGCAGCCAGGTGCTGGCCAATCCGCGCGTGACCGCAGATGTCATCAAGCTCTGGATGCGCGCGTGA
PROTEIN sequence
Length: 81
MPPASQPPATPRIVDFQPWMLAALGGGLLLIGLAVWRRPRPAAAVEPPVVDLDAELEVTRSQVLANPRVTADVIKLWMRA*