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SCN18_10_11_15_R3_B_scaffold_3104_2

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1201..2145)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus thioparus RepID=UPI0003782783 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 571
  • Evalue 3.30e-160
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 316.0
  • Bit_score: 548
  • Evalue 1.10e-153
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 316.0
  • Bit_score: 575
  • Evalue 2.50e-161

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAGCCATCCACCCAGTGACGAACCAGACGAACTGAGCCCGGAGCAACCAGACCCGGATCAGCATGCCATGATGGATAGCAACGAGATTCTGGCGTCCGCCATCCTCGATGAACCTCAGGTCGACGTCACCCAGCTGTATCTCAATGAGATCGGGCTGGCCCCCCTGCTGAGCGCGGAAGAGGAAGTCGCCCTGGCGCGGCGCACCGTGCAGGGAGATTTCGAAGCGCGCCAGACCATGATCGAGCGCAACCTGCGCCTGGTGGTGAACATCGCCAAGCATTATTCCAATCGCGGCCTGACGCTGCTCGACCTGGTGGAAGAGGGCAACCTCGGCCTCATCCACGCACTGGAGAAATTCGATCCCGAGCGCGGCTTCCGTTTCTCGACCTACGCCACCTGGTGGATCCGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATTCGACTGCCGGTGCACATCATCAAGGAACTCAACATCTATCTGCGCGCCAAGCGCCATCTGGAAACGCACGGCATCACCGATGCCAGCGCGGATGATATTGCCTTGCTGACGGGGCATGCGGTCGAAGACGTGCGCCGCATCATGCAACTGAACGAGCGGGTCGCTTCGCTCGATGCCCCGCTCGATGTCGACCCCACGCTGTCGCTGGGAGAAGCGATTGCCGACGACAATGCGCATCTGCCGGATGAAATGCTTCAGCTCGAGGAGATCGAGCACCACGTCCATGAATGGATCACCCAGCTCAACGACAAGCAGCGCTGGGTGATCGAACGCCGTTTCGGCCTGAACAACCGCGAAGCCTGCACGCTGGAGGATCTGGCGCTCGAATTGCAGGTGACGCGTGAGCGCGTGCGGCAGATCCAGATGGAATCCCTGCGCGTACTGAGGCAACTGCTGAGACGGCGCGGCGTATCCCGGGACGAGCTGTTCTGA
PROTEIN sequence
Length: 315
MSHPPSDEPDELSPEQPDPDQHAMMDSNEILASAILDEPQVDVTQLYLNEIGLAPLLSAEEEVALARRTVQGDFEARQTMIERNLRLVVNIAKHYSNRGLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHIIKELNIYLRAKRHLETHGITDASADDIALLTGHAVEDVRRIMQLNERVASLDAPLDVDPTLSLGEAIADDNAHLPDEMLQLEEIEHHVHEWITQLNDKQRWVIERRFGLNNREACTLEDLALELQVTRERVRQIQMESLRVLRQLLRRRGVSRDELF*