ggKbase home page

SCN18_10_11_15_R3_B_scaffold_4854_2

Organism: SCN18_10_11_15_R3_B_SCN_pilot_derep_Thiobacillus_3_64_343

near complete RP 51 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1014..1253)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein id=12495604 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 158
  • Evalue 2.20e-36
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 147
  • Evalue 1.40e-33
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 79.0
  • Bit_score: 149
  • Evalue 1.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGATGGAAGAAAACGAAATCGCTGCATGTCTGCGGCGGTCGCTCAATCGTTATTTCAAGGATCTCGATGGCGAAGCGCCGAGCGAGATCTACAGCATGGTGGTCAGCGTGGTGGAAAAACCCCTGCTGACCTATATCCTCGACCGCGCCGAAGGCAACCAGACACGCGCCGCCGACATGCTCGGCATCAACCGCAACACCCTGCGCAAGAAAATGCGCGAACACGGCCTTTCCGATTAA
PROTEIN sequence
Length: 80
MMEENEIAACLRRSLNRYFKDLDGEAPSEIYSMVVSVVEKPLLTYILDRAEGNQTRAADMLGINRNTLRKKMREHGLSD*