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SCN18_30_10_14_R4_P_scaffold_424_11

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(8989..10263)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 424.0
  • Bit_score: 803
  • Evalue 9.80e-230
Transcription termination factor Rho n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW45_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 424.0
  • Bit_score: 784
  • Evalue 4.40e-224
Transcription termination factor rho similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 424.0
  • Bit_score: 784
  • Evalue 1.20e-224

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGCATCTCGCCGAACTCAAGGCAAAGTCCCCCGCGGATCTGCTCAGCTTTGCCGAATCATTGCAGATCGAAAACGCATCGTCCCTGCGCAAGCAGGACATCATGTTCGCCATCCTCAAGAACCTGGCCGAGAACGATCAGGCGATCCATGGGGAAGGCACGCTCGAGATCCTGCCGGACGGCTTCGGCTTTCTTCGCAGCCCGGAGGCCAACTACCTTCCCGGCCCCGACGACATCTATGTCAGCCCGAGCCAGGTGCGGCGCTTCGGACTGCGGACCGGGGACACGGTCGAGGGGCAGATCCGTGCGCCGAAGGACGGGGAGCGGTATTTCGCGCTTCTCAAGGTCGACACGGTCAATTTCGAGCCGCCCGACGCGGTGCGTCACCGGATCAACTTCGACAATCTGACCCCGCTCTATCCCGACGAGCGGCTCAAGATGGAGATGGAGAACTTCCAATCCGTCGCGAAGGGGCCGCAGAAGGACTACACGCCGCGGGTGATCGACCTGATCGCACCGATCGGCAAGGGCCAGCGTGCGCTGATCGTCGCGCCGCCGCGCACCGGCAAGACGGTGATGCTGCAGAACATCGCCACCGCGATTTCCGCCAACCATCCGGAAGTCTTCCTGATCGTGCTGCTGATCGACGAGCGGCCCGAGGAAGTCACCGACATGGCGCGCAGCGTGAAGGGCGAGGTGATCGCCTCCACCTTCGACGAGCCGGCGACGCGGCATGTGCAGGTCACCGAGATGGTGCTGGAGAAGGCCAAGCGCCTGGTCGAGCACAAGCGTGACGTGGTGATCCTGCTGGACAGCATCACGCGCCTCGCCCGCGCCTACAACACCGTCGTGCCGTCGTCCGGTAAGGTGCTGACCGGTGGTGTGGACGCCAATGCGCTGCAGCGGCCGAAGCGCTTCTTCGGGGCCGCGCGCAACATCGAGGAAGGCGGCTCGCTTACCATCATCGCGACCGCGCTGATCGACACCGGCAGCCGCATGGACGAGGTGATCTTCGAGGAGTTCAAGGGCACCGGCAATTCGGAGCTGATCCTCGACCGCAAGCTGTCCGACAAGCGCAGCTTCCCGGCGATCGACATCACCAAGTCGGGCACCCGCAAGGAAGAGCTGCTGGTCGAGAAGTCGACGCTGTCGAAGATGTGGGTCCTGCGCCGCATCCTGAACCCGATGGGCACGGTGGATGCGATGGAGTTCCTGTTGGACAAGCTGAAGTACAGCAAGACCAACAACGACTTCTTCGACGCGATGAACACCTGA
PROTEIN sequence
Length: 425
MHLAELKAKSPADLLSFAESLQIENASSLRKQDIMFAILKNLAENDQAIHGEGTLEILPDGFGFLRSPEANYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIRAPKDGERYFALLKVDTVNFEPPDAVRHRINFDNLTPLYPDERLKMEMENFQSVAKGPQKDYTPRVIDLIAPIGKGQRALIVAPPRTGKTVMLQNIATAISANHPEVFLIVLLIDERPEEVTDMARSVKGEVIASTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKLSDKRSFPAIDITKSGTRKEELLVEKSTLSKMWVLRRILNPMGTVDAMEFLLDKLKYSKTNNDFFDAMNT*