ggKbase home page

SCN18_30_10_14_R4_P_scaffold_1017_10

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(8282..9148)

Top 3 Functional Annotations

Value Algorithm Source
senescence marker protein-30 n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003773496 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 291.0
  • Bit_score: 286
  • Evalue 2.00e-74
Gluconolaconase {ECO:0000313|EMBL:KGM36000.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 289.0
  • Bit_score: 287
  • Evalue 2.10e-74
SMP-30/gluconolaconase/LRE domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 289.0
  • Bit_score: 282
  • Evalue 1.00e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGCACGTTCGAATTGGTCTGGGACAGCCGCTGTGGCGTGGCCGAATCGCCGGTTTGGGACCGGACCAATCGACGGATCCTGTTCGTCGACATCCCAGGCAAGCGCATCAATGCGCTCTCGGTCGATACCGGTGCCCAGCAGAGCTGGGATCTCCCCGAGGTCGTTCCCAGCCTGGGGCTGGCGCGTTCGGGGCGGCTGGTGGTGGCCCTGCGAAGCCGGGTGGTGATGTTCGATCCCAAGACCGGCACGATCGACGAGCTCACCGGCCCGATCGATCAGCCGGCGAGCACGCGCCTGAACGACGGCAAGGTCGGTCCGGACGGGGCGTTCTGGGTGGGCTCGATGGACGAACACTCGCCCCGCCAGCCGATCGGTTCGCTCTACCGCGTGACGCCAGACGGCCGGGTGGAGACCCGAACCACGGGGATCGCCTCCTCGAATGGTCTGGCGTGGTCGCCCGATGAGAGGGTGATGTATCATTCCGATACCTCGGGCGGACTGATCGAAGCCTGGGATTTCGACCCGACCACCGGCGACATGCGCAACCACCGCGTGCTCGCGCGGCTCGGCAACGAGGACGGCCGTCCCGACGGCGCCGCCATGGACGCCGACGGCAACTACTGGTCGGCCGGACCCTCTGCCGGGGTGCTCAACTGCTTCTCCCCCACCGGTGAACTGCTGGCGAAGATTCCCTTCCCGGTTCCCGGCCCGACCATGCCCTGCTTCGCGGACGAGCAGCTCTACGTGACGTCGCTGCGGGAGGGGAAATCGGCCGAGGTGCTCGCCGCGCACCCCACGCTGGGCGGGCTGTTCCGCGCGCCAGCCCCGGCGACCGGCGCCCCCGTGGCGGTCTTCGCGGACTGA
PROTEIN sequence
Length: 289
MSTFELVWDSRCGVAESPVWDRTNRRILFVDIPGKRINALSVDTGAQQSWDLPEVVPSLGLARSGRLVVALRSRVVMFDPKTGTIDELTGPIDQPASTRLNDGKVGPDGAFWVGSMDEHSPRQPIGSLYRVTPDGRVETRTTGIASSNGLAWSPDERVMYHSDTSGGLIEAWDFDPTTGDMRNHRVLARLGNEDGRPDGAAMDADGNYWSAGPSAGVLNCFSPTGELLAKIPFPVPGPTMPCFADEQLYVTSLREGKSAEVLAAHPTLGGLFRAPAPATGAPVAVFAD*