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SCN18_30_10_14_R4_P_scaffold_1165_27

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(25749..26411)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5BFF1 related cluster n=1 Tax=unknown RepID=UPI0003D5BFF1 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 209.0
  • Bit_score: 323
  • Evalue 8.40e-86
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ETI60505.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 209.0
  • Bit_score: 323
  • Evalue 1.20e-85
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 212.0
  • Bit_score: 286
  • Evalue 5.50e-75

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTCGAAGTCCCGCGAAAACAACGATCGCTCGGACGAGAGCGATGAACTTGAGGCCGCAAAGCCGGCTGATGCCGCGGTTCGGCGCGCGCTGGTCGAGGCTCGCCACGAGTTCCTGGCGTTTCTGCAGCAGCGGGTGGGCAGCAAGGCCGACGCCGAAGAGCTGCTTCAGCGGTTCTCTCTGCGTGCCTTGGAACGTGCGTCGCAGTTGCGCGACGTCAGAAGCGTTCGAGGATGGCTCGGTCGCATTTTGGCGACCACCATCGTTGACCACCAACGGCGTGCAATCCGGAAGCGGCAGCGTGAAGTCAGCGTCGATCCCACAGACTTTGATGAAATCGCAGTCGAGCCCGATCGCGAGACGGACGAAGCAATCTGTAACTGTCTGCACAAGCTTCTTCCAACGATGAAGCCGGACTACGCGGACATTCTGTGGCGATCGGACATCCTGGGAGAGCCGCGCGACCGCATCGCCGCCAGCCTTGGAACGACACTCAACAACGTGACCGTTCGCCTGCATCGGGCGCGCCAGACACTCCGAAAGAGACTGGAGGAGATGTGTCTGACCTGCCCGGTCCACGGATTCCTGGATTGCCGCTGCGACGAAGCCGAAGAGATCCGTCGGCGCGTGGTGGCGTCCAAATCGACCCGTGAATCAAGCTGA
PROTEIN sequence
Length: 221
MSKSRENNDRSDESDELEAAKPADAAVRRALVEARHEFLAFLQQRVGSKADAEELLQRFSLRALERASQLRDVRSVRGWLGRILATTIVDHQRRAIRKRQREVSVDPTDFDEIAVEPDRETDEAICNCLHKLLPTMKPDYADILWRSDILGEPRDRIAASLGTTLNNVTVRLHRARQTLRKRLEEMCLTCPVHGFLDCRCDEAEEIRRRVVASKSTRESS*