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SCN18_30_10_14_R4_P_scaffold_1347_5

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(4607..4876)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUC1_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 89.0
  • Bit_score: 148
  • Evalue 2.60e-33
DNA-binding protein HU similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 89.0
  • Bit_score: 148
  • Evalue 7.30e-34
DNA-binding protein HU {ECO:0000313|EMBL:ABI61581.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 89.0
  • Bit_score: 148
  • Evalue 3.60e-33

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGTCGAAAGCCTTCATCGCCCAGGTCATCCAGGATTCGGCCGACCTGACCGGGGCCGCTGCGAATCGCGCCGCCGGCGCGCTCATGGAGGCGATCGTCAAGGAGCTGAAGAAGGCCGGCAAGTTCACGCTGCCGAGCTTCGGGACGTTCACGGTGAAGAAGACCAAGGCGCGCAAGGGGCTGAACCCGCGCACCGGCGAGGCGATCAAGGTGAAGGCCGGCAAGACCGTGCGCTTCAAGGCCTCCCCCACGCTGAAGAAGGCGGTCTGA
PROTEIN sequence
Length: 90
MSKAFIAQVIQDSADLTGAAANRAAGALMEAIVKELKKAGKFTLPSFGTFTVKKTKARKGLNPRTGEAIKVKAGKTVRFKASPTLKKAV*