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SCN18_30_10_14_R4_P_scaffold_1347_13

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(14625..15152)

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LYX9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 179.0
  • Bit_score: 183
  • Evalue 1.40e-43
RNA polymerase sigma factor {ECO:0000313|EMBL:KEO52378.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 179.0
  • Bit_score: 184
  • Evalue 1.20e-43
ECF sigma similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 179.0
  • Bit_score: 183
  • Evalue 4.00e-44

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACGCCGCCCGAGATGGACCAGGGCGTGCTGGGCCGCATCGAGGCGTCCCTCCCCGCGCTGCGCCGCTACGCGATCGCGTTGCTGCGCAACCGGGACGATGCCGACGACCTCGTTCATGACTGCGTCGTGCGTGCGCTCGACAAGCTGCACACACGCCGCGACGATGCGGATGTCAGGGCGTGGCTGTTCACCATCATGCACAACCTGTTCGTCAGCCAGCTTCGCCGCAAGCGCGTGCGGCCGGTCGCCGAACCGCTGGAAGAGCGGCATGAGGACGCGCATGCCGCCGAGGCGGGGCAGGACGGGCCTTTGCGGTGGCGCGACCTGATGCGCGCGCTGGCCCAACTGCCCGAGGAGCAGCGCAGCGTGCTGCTGCTGGTCTCGGTCGAGGACCTCTCCTATGCGGAGACGGCCACGGTGCTGGATGTGCCGATCGGCACCGTGATGTCCCGGCTTTCGCGGGCGCGGGAGCGGCTGCGCCAGCTGACCGACGGCGAACGTCCGCCTCTGCGGAGGGTGAAGTGA
PROTEIN sequence
Length: 176
MTPPEMDQGVLGRIEASLPALRRYAIALLRNRDDADDLVHDCVVRALDKLHTRRDDADVRAWLFTIMHNLFVSQLRRKRVRPVAEPLEERHEDAHAAEAGQDGPLRWRDLMRALAQLPEEQRSVLLLVSVEDLSYAETATVLDVPIGTVMSRLSRARERLRQLTDGERPPLRRVK*