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SCN18_30_10_14_R4_P_scaffold_2025_12

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(8110..9504)

Top 3 Functional Annotations

Value Algorithm Source
Coupling protein VirD4, ATPase required for T-DNA transfer n=1 Tax=Rhodovulum sp. PH10 RepID=J6LC28_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 395.0
  • Bit_score: 141
  • Evalue 2.10e-30
Coupling protein VirD4, ATPase required for T-DNA transfer {ECO:0000313|EMBL:EJW10838.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 395.0
  • Bit_score: 141
  • Evalue 3.00e-30
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 164.0
  • Bit_score: 57
  • Evalue 6.70e-06

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1395
ATGCCTGGCATGCCGCTTTATTCGGATACAGAGCGGCATATCCTGATGCTGGGATTGAACGGCGCAGGAAAGTCGACACGGTTTCTTATCGAACTGCTGGCGACGGCAAGCAATCGTTCGCTCCTCGTATTCGATTTGAAGGGGGAGCTCGCCTATCAGACGGCGGACCTTAGGCGGCGATATTCGGATGTGTACTTCATCAACCCGCACCGGCAGCACGGTCTGCCGTCTGATGGGTTCAATCCCGCCAAGCTCGATCCTGACGACCCCCTCTTCTTCAGTCAGCTCACCGATATCGGTGCGGCCGCGATCGATTTTTCCGAGAAGGACAAGCATTGGGATGAATCTGCCCAAAGCCTGTTCGAGGGCTTCCTTGGCTGGGAGGCGATACTGGCGCGGCGCGAAAGGCGTCTGCCTTCGCTCGCCAATGTCCGGCGCATGCTGTGCGAGCCTGACGAGTACGAGGTGACGCGCGATGCGCGCGGCCGCCGTCAGGAGGTGCTGGTCCGGGGCGTCACTTTCACGGCGCAGCGGATCATCGCCGAAGGTGGTTATTCGCTGGCCGGCCTCGTCGGCCGCTTTGTGCGCAAGCATGGGCTGAACGAGCTGTCGGGCATTCAATCAACGGCAGATACCCAGACCAAATGGGTTCTCGACCCCATGATGGCGGCCGATCTCGCCAAGCCAGGCGTCGACTTCAATGCGATGCGCACGCGGCCCACGACAATCTACGTGATGATTCATCCTATGGAGCTGCGCAAAAACAAGCGCTGGACCCGGCTCATCACCTCGGCTGCGCTGTGCGCGCTGATGCAGCCGGGTGCCGTTCGCACGCTCATGGTGCTGGATGAATTCTATGCCTCGGTCGGCAACCTGCCGATCCTGAACGATGTGTGGGCGCTGGTGCGCGGCTACGGCATCCAGATCATGCCAATCGTGCAATCCGTCCTGCAGCTGCAGGCGCTCTACAAAGAGGAATGGGAAAACTATGCCGCGCAGGCGGGCCTCGTGATGTCGCTCGGTCCTGCCGGCGACAATCCGACTGCCGAGTGGATGAGCAAGCAGTGCGGTGTCACCACAATCCTGAAGGCCTCGCTCAACGAGAGCGACGGCTTCAACATTGGTGACGGGACCGGCAGCGGCACGACCACTACCGGCATATCGAGCAACAGCAATCAGAACAGCGGGCGCAATCGCGGTGCCGCCATGAACTGGCAGCAGGCGGAATCCCGTGTGCTTCGCCCCCAGGACATCAAGAACATTCGCGCAGGTCACGGACTCGCATGGGTGCCGGGGCTCGGCACCCGGACCATTCCTTATTTCGCGCCCAACTACTTCCGGCGCAACGCGCCCTGGGTGCGCGAGGTCCGGCAAAATCCATTTCGCGGGGGTTAG
PROTEIN sequence
Length: 465
MPGMPLYSDTERHILMLGLNGAGKSTRFLIELLATASNRSLLVFDLKGELAYQTADLRRRYSDVYFINPHRQHGLPSDGFNPAKLDPDDPLFFSQLTDIGAAAIDFSEKDKHWDESAQSLFEGFLGWEAILARRERRLPSLANVRRMLCEPDEYEVTRDARGRRQEVLVRGVTFTAQRIIAEGGYSLAGLVGRFVRKHGLNELSGIQSTADTQTKWVLDPMMAADLAKPGVDFNAMRTRPTTIYVMIHPMELRKNKRWTRLITSAALCALMQPGAVRTLMVLDEFYASVGNLPILNDVWALVRGYGIQIMPIVQSVLQLQALYKEEWENYAAQAGLVMSLGPAGDNPTAEWMSKQCGVTTILKASLNESDGFNIGDGTGSGTTTTGISSNSNQNSGRNRGAAMNWQQAESRVLRPQDIKNIRAGHGLAWVPGLGTRTIPYFAPNYFRRNAPWVREVRQNPFRGG*