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SCN18_30_10_14_R4_P_scaffold_3249_2

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(210..1643)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 466.0
  • Bit_score: 715
  • Evalue 6.10e-204
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 466.0
  • Bit_score: 715
  • Evalue 3.00e-203
isopropylmalate isomerase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000378F3FB similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 466.0
  • Bit_score: 716
  • Evalue 1.30e-203

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGACCGCGCCACAAGCGACCCCCGGCTCCGAGACCAGCACCGCGCCGCGGACCTTGTTCGAGAAGGTCTGGGCCAGCCACGCGATCCTGACGCGCGAGGATGGGACCGCGCTGCTCTGGATCGACCGCCATTTCGTCCACGAGGGCAGTTTCCACGGGTTCGGCATGCTGGAGCATTCCGGCCGCCCGCTTGCGCGACCGGACCTGACGATCGCCGTGGCCGACCACTACGTGCCATCGCATGCGCGGACCGAACCGATCCGCGATCCCGAGGTCGCGGGGATGATCACGACCTTGCGGCGCAATGCGGAACGGCATGGGGTCGACCTGCTGGATCTCGACGACCCCCGGCAGGGGATCGTGCACGTGATCGGGCCGGAGCAGGGCTTGACCTTGCCGGGGCTGACCGTGGTCTGCGGCGACTCCCACACCTCGACGCATGGCGCGTTCGGGGCGCTCGCCTTCGGCATCGGCGCGTCCGAGGTCAGCCACGTGCTGGCGACGCAGACGTTGTGGCAGCGCCGGCCGAAGACCATGCGCATCACGGTGGACGGCACGCTCTCTCCGCACGTGGCGGGCAAGGACGTGATCCTGGCGATCATCGGCCGCATCGGCGCGGGCGGGGCGGTCGGCCACGTGATCGAGTATGCCGGCAGCGCGATCCGGTCCCTGCCGATGGAGGGGCGGCTGACCGTCTGCAACATGTCGATCGAGGCGGGGGCGCGGGCCGGCATGATCGCGCCGGACGAGACGACCTTCGCCTGGGTGGAGGGGCGGCCACGCGCGCCCAAGAGCGACGCCTTCGCCGCTGCCGTCGCGGCCTGGCGCCGCCTGCCGACCGAGGAGGGCGCGCGCTTCGACCGGGACGTCGTGCTGGACGCGGCCGAGATCGCGCCCACCGTGACCTGGGGCACCTCGCCCGAGACCGCCTTGCCGGTGACGGGCGTCGTGCCCGACCCCGCCACTGCGACGGATGCCGCCAAGCGCGCGCGGATCGCCGACCAGCTCGACTACATGGGCCTCGCGCCGGGGCGGCCGCTGGAGGGCATCCCGGTGGACCGGGTCTTCATCGGCAGTTGCACCAACGCCCGCCTGCCGGACCTGCGCGCCGCCGCCGCTGTGCTGCGCGGGCAGCGCGCGGTGGTGCCGGGCCTGGTCGTCGCGGGATCGGTGCCGGTGAAGCGCGCCGCGGAAGCCGAGGGGCTGGACCGCGTTTTCCGCGACGCCGGCCTGACCTGGGGGGAGCCCGGTTGCTCCATGTGCGTCGGCATGAACGGTGACCTGGTGAAGCCCGGCGAGCGCTGCGCCGCGACCAGCAACCGCAACTTCCAGGGACGCCAGGGACCGGGTGCGCGCACCCACCTGATGTCGCCGGCCATGGCCGCGGCCGCCGCGCTGCGCGGCGCGATCACCGACGTGCGGAGGGTCGCATGA
PROTEIN sequence
Length: 478
MTAPQATPGSETSTAPRTLFEKVWASHAILTREDGTALLWIDRHFVHEGSFHGFGMLEHSGRPLARPDLTIAVADHYVPSHARTEPIRDPEVAGMITTLRRNAERHGVDLLDLDDPRQGIVHVIGPEQGLTLPGLTVVCGDSHTSTHGAFGALAFGIGASEVSHVLATQTLWQRRPKTMRITVDGTLSPHVAGKDVILAIIGRIGAGGAVGHVIEYAGSAIRSLPMEGRLTVCNMSIEAGARAGMIAPDETTFAWVEGRPRAPKSDAFAAAVAAWRRLPTEEGARFDRDVVLDAAEIAPTVTWGTSPETALPVTGVVPDPATATDAAKRARIADQLDYMGLAPGRPLEGIPVDRVFIGSCTNARLPDLRAAAAVLRGQRAVVPGLVVAGSVPVKRAAEAEGLDRVFRDAGLTWGEPGCSMCVGMNGDLVKPGERCAATSNRNFQGRQGPGARTHLMSPAMAAAAALRGAITDVRRVA*