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SCN18_30_10_14_R4_P_scaffold_4738_4

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: 1426..2667

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHM1_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 164
  • Evalue 1.20e-37
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 164
  • Evalue 3.50e-38
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAJ93541.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 166.0
  • Bit_score: 164
  • Evalue 1.70e-37

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGCTTCCATCCTTCGACCGGCATCGCCGCCGCCCTATGCGCGCCGCACCCGCGGCCATTCCCCTTTCGACGGCCTCGCACCCGGCCGGTCCGAACACGGCGACCCGGTCTCGAACGCTGCACTGGTTGCCGTGGAACCGCGGACCCGCCGTGCCGCCGGACCCTGGGCGGAGCAGGTCGACACCTCCCGGACGGTCCTGTCCATCGCGCTCGAGGAAGTCGGCGGACAGACCGAACTGCGCCTGGGCCCGTCCCGGTCCGGACCGGCCGCGGCGGGTGCTCGTCCCGGGACCGTCCCCGTCCAGCACGTCAGCCTCCTCCCGGCAGGGACCGCGGTCTGGGAATATTGTGCGGGGATCCGGCGGTTCCGCGGCATCCGGTTCCATTTCGACTTCGCCCGCGCCTGGCACCGCTGGGGACCGGACAGCGGGATCGTGCAGGAGCTGCCGCCGAACTGGCGTGAGGGCACGACGGAGGCATACGGCCTGCCGCCGACGGCCGGTCCCGCCACCGGCGGGCGATACACCTCGGCCGCCGCGCTGTTGCCGGCGGCGCTCGTGGTCCCGCCTGCATCTCCGGTCGAGCGGTCCCACGTGCCGGGAGCCTCCCCCGCACGCCGGCCCATGGCGGCCGAAATCCTGGCCCCGATCCCGCGTCTCATGTTCTGCGATGACCGCATCTGGCGGTGCGCGGACCTGATCAGCCGCGAATGCGAGATCCGCGATGGCCCGGACGGCCGTTTCACCGACAGTCTGATCGCCGCGATGATGGTCGCGCTGTTCGAGCATCTCGCACGGCGCGGCGAGCCGCCGGCGACCGCCGGCCTCGCCCCGTGGCAACTCCGCCGCGTGCTGGAGCACCTGGAGCAGCACGCGTTCCAGGTCATCCGGCTGGCCGACCTGGCCACGCTCGCCGGCCTGTCCGTCTCCTACTTCACCCGCGCCTTCAAGGCCTCCACCGGGCTGCCGCCGCATCGTTGGCAGACGCGGCTGCGGATCACCCATGCCCAGCGCATGCTGATGGAGGGCGATCGCCCCCTGACCGACGTCGCGCTGGCGGTGGGCTTTGCCGACCAGAGCCACTTCACCCGCGTCTTCCGCGCCCAGGTGGGCGTCACCCCTGGCCAGTGGCGGCGCGAGCAGGCGAGCTGCCCGTCGACACGTCCGGACCGCGCCGACGGGACGCATCCGACCGAGGCCGCGCACGATCGTGCAAGCGCAATTCGCGTTTGCCGGGTCTGA
PROTEIN sequence
Length: 414
MASILRPASPPPYARRTRGHSPFDGLAPGRSEHGDPVSNAALVAVEPRTRRAAGPWAEQVDTSRTVLSIALEEVGGQTELRLGPSRSGPAAAGARPGTVPVQHVSLLPAGTAVWEYCAGIRRFRGIRFHFDFARAWHRWGPDSGIVQELPPNWREGTTEAYGLPPTAGPATGGRYTSAAALLPAALVVPPASPVERSHVPGASPARRPMAAEILAPIPRLMFCDDRIWRCADLISRECEIRDGPDGRFTDSLIAAMMVALFEHLARRGEPPATAGLAPWQLRRVLEHLEQHAFQVIRLADLATLAGLSVSYFTRAFKASTGLPPHRWQTRLRITHAQRMLMEGDRPLTDVALAVGFADQSHFTRVFRAQVGVTPGQWRREQASCPSTRPDRADGTHPTEAAHDRASAIRVCRV*