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SCN18_30_10_14_R4_P_scaffold_5305_3

Organism: SCN18_30_10_14_R4_P_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_11

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38
Location: comp(3113..4795)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterised protein {ECO:0000313|EMBL:CRE09403.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 442.0
  • Bit_score: 319
  • Evalue 7.40e-84
choline dehydrogenase id=12552939 bin=BDI species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 553.0
  • Bit_score: 267
  • Evalue 2.40e-68
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 465.0
  • Bit_score: 154
  • Evalue 8.30e-35

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Taxonomy

Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1683
ATGCGTCGCCTCGCCGGCATGGAAGACCAGCTCACGCGTGGGCGTCGCGTTCACCCACCACTGGTCGCGCGCATGCCACGGCGATTGCGGATCGCCGCTGGCGGCGGCGGCGCGATCGGCCTCCTCCTGTTCGGCCAGCAGCTCCGCGAGCGCCGCGGCCGCGAGCACCGGGGTGGGTGGTGCGGGGGCGGGCGCCAGCAGCGTCGCGGCCTCCCGCGCGATGAAGCCGGTGTCGATCCCCCCGGCGGCGAAGGCGGGATGCGCGGCAATGCGGCCGAGAAGGTCGAGATTCGTGATGACGCCGGCGACCGTGCAGTCGCGCAAGGCAAGCTGCAGGCTGCGCAACGCGGCCTCGCGTGTCGGCCCGTGGCAGATCACCTTGGCGAGCATCGCATCGTAGTGGATCGAGATCGTATCACCTGCAACGAAGCCGGTGTCGATCCGCACCTCCGCGTCCGGTGCCGGCATGCGGAAGGCGGTGAGCCGGCCGATCGAGGGGGCGAAGTCGCGCGCCGGATCCTCGGCATAGACGCGCGCCTCGAACGCATGGCCGGCGAGATGGATCTGCGCCTGCGTCGCGGGCAATTCCTCGCCGGCGGCGACACGGAGCTGCCATTCCACGAGGTCGAAGCCGGTCACCATCTCGGTCACGGGATGCTCGACCTGGAGCCGCGTGTTCATCTCGAGGAAGAAGAACCCGTCGGCATCCGCGACGAACTCCACCGTGCCGGCGCCGACATAGCCGACTGCCTGTGCGGCGGCCACGGCGGCGGCCCCCATGGCGGCGCGGCGATCGGCGGAGAGGCCGGGCGCGGGCGCTTCCTCGATCACCTTCTGGTGCCGGCGCTGGGCGGAGCAGTCGCGTTCGAACAGGTGGACCGCATTGCCGAACGTGTCGGCGAAGACCTGCACCTCGATATGGCGCGGCCGCTCGAGGTAGCGCTCGACCAGCACCCGGTCGTCGCCGAAGGCCGAGGCGGATTCCTGCCGCGCCGAGGCGAGCGCCGCGGCGAAATCGGTTGCAGCGGAAACCACGCGCATGCCGCGCCCGCCGCCCCCCGAGACCGCCTTGATCACCACCGGGAACCCGATGCGCGCAGCCTGGTCCGCGAGGAAGTCCGGATCCTGGGTGTCGCCGTGATAGCCGGGCAGCAGCGGCACGCCGCTTTGCTCCATCAGCGCCTTGGCTGCGGACTTCGAGCCCATGGCGCGCATCGCGGAGGCGGGCGGGCCGACGAAGGTGATCCCGGCCTCGGCGCAGGCCTCCGCGAAGGCCGGGTTCTCGGAGAGGAAGCCGTAGCCGGGATGGATCGCCTCGGCGCCGGTTGCGCGCGCCGCGTCCAGGATCCGCGCGATGTCCAGATAGGAGTCGCGCGCGGGCGCGGACCCGATCGGCACGGCCCGATCCGCCGCCTGCACGTGAAGCGCACCGGCATCGGCCGCGGAGAACACGGCGACGGTCTCGATCCCCATGCGCCGCGCGGTGCGGGCGATGCGGACGGCGATCTCGCCGCGATTGGCGATCAGGAGCGTGCGGAACATCGCGCCTCTCACATGCGGAACACGCCGAAGCGCGTCTCGTTCACCGGGGCATTGAGGGCGGCCGACAGCGCAAGGCCCAGCACGCGGCGGGAATCGGCCGGGTCGATCACGCCGTCATCCCAGAGCCGCGCGGTCGCGTAG
PROTEIN sequence
Length: 561
MRRLAGMEDQLTRGRRVHPPLVARMPRRLRIAAGGGGAIGLLLFGQQLRERRGREHRGGWCGGGRQQRRGLPRDEAGVDPPGGEGGMRGNAAEKVEIRDDAGDRAVAQGKLQAAQRGLACRPVADHLGEHRIVVDRDRITCNEAGVDPHLRVRCRHAEGGEPADRGGEVARRILGIDARLERMAGEMDLRLRRGQFLAGGDTELPFHEVEAGHHLGHGMLDLEPRVHLEEEEPVGIRDELHRAGADIADCLCGGHGGGPHGGAAIGGEAGRGRFLDHLLVPALGGAVAFEQVDRIAERVGEDLHLDMARPLEVALDQHPVVAEGRGGFLPRRGERRGEIGCSGNHAHAAPAAPRDRLDHHREPDARSLVREEVRILGVAVIAGQQRHAALLHQRLGCGLRAHGAHRGGGRADEGDPGLGAGLREGRVLGEEAVAGMDRLGAGCARRVQDPRDVQIGVARGRGPDRHGPIRRLHVKRTGIGRGEHGDGLDPHAPRGAGDADGDLAAIGDQERAEHRASHMRNTPKRVSFTGALRAADSARPSTRRESAGSITPSSQSRAVA*