ggKbase home page

SCN18_10_11_15_R1_B_scaffold_252_16

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(17988..18524)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI000364C8BA similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 176.0
  • Bit_score: 255
  • Evalue 2.30e-65
Uncharacterized protein {ECO:0000313|EMBL:EJZ20800.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 178.0
  • Bit_score: 249
  • Evalue 2.30e-63
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 176.0
  • Bit_score: 247
  • Evalue 2.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATCGAGCAGACCGATCCCGGTCTCGGCCGCCGGGCGCGCCTCAGGGCGATGACGGCCCTTGCCGTCGCCGTCCTCATCCTCAGCAGTCTTTATCTTTGGAACCCGGATAATTTCTATCTCTGGGCCAAGGCGCTGCATGTCGTCGCCGTCATCTCCTGGATGGCCGGCCTGCTCTACATGCCTCGACTTTTCATCTATCACTTCGATTCCGAGCCGGGTTCAAAGCAGTCGGAAACCTTCAAGGTGATGGAACAGAGGCTGTTGTCGGTCATCATGCGTCCAGCCATGGCGGCTGCCTGGCTGCTCGGGCTCTACATCGCCTGGACGATTTACGGTTTCCACGGCGGCTGGCTGCATGCAAAACTGCTGCTGGTCGTGCTTCTGACGGGTTATCACGAGTTCCTGGGGAAGGCGGTCAAGGATTTCGCTTCCGACCGGCGCGAAAAATCCCCGCGCTTCTGGCGACTGATGAACGAGGTTCCGACGCTGCTGATGCTCGCCATCGTCATCCTCGTCATCGTCAAACCCTTCTGA
PROTEIN sequence
Length: 179
MIEQTDPGLGRRARLRAMTALAVAVLILSSLYLWNPDNFYLWAKALHVVAVISWMAGLLYMPRLFIYHFDSEPGSKQSETFKVMEQRLLSVIMRPAMAAAWLLGLYIAWTIYGFHGGWLHAKLLLVVLLTGYHEFLGKAVKDFASDRREKSPRFWRLMNEVPTLLMLAIVILVIVKPF*