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SCN18_10_11_15_R1_B_scaffold_378_7

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3705..5147

Top 3 Functional Annotations

Value Algorithm Source
DNA photolyase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CJC9_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 476.0
  • Bit_score: 630
  • Evalue 9.20e-178
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KJF69296.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 474.0
  • Bit_score: 635
  • Evalue 5.20e-179
DNA photolyase similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 476.0
  • Bit_score: 630
  • Evalue 2.60e-178

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
TTGGCCTCTCCTCCTCCCATCCTCCTGTGGTTCCGCAAGGATCTGCGTCTCGACGACAATCTGGCCCTGACGGCGGCCGTCGAAACCGGCCGGCCGGTGATCCCTGTCTATATCCTCGACGAGTCCGATGCGACAATCGCACCGCTTGGCGCCGCCCAACGCTGGTGGCTGCATCATTCGTTGAAAAGCCTGCGAAAATCCCTGCGCGCCACCGGCAATGATCTCCTCCTGCGGCGCGGCCCATCGGAAAAAATCCTGCAGGAACTGATCGACGCCACCGGCGCCGATACGATCTTCGCCAACCGCATCCATGAGCCGCAGCGGCTCGACCGGGAACGCGTCTTCGCGGAAGCGCAAAAACAACGCGGCCTGCGCTTCACCGCCTTTGCCGGGCAATTGCTGCACGATCCGCAGAGGCTGGCGACCGGCAGCGGCGGCGCCTTCCGGGTTTACACACCCTTCTGGAACGCCTTCCAGCGCCAGCACGAACCGCGCCCGCCGGTGGAGGCGCCTTCGTCGATCCCTGCTTTCCGTGCGCCGCCTGAGACGGACGATCTCGACGCCTGGAACTGCGTGCCTGCGAAACCGGACTGGGCCGCGCATTTTCCGCAAAGCTGGACGCCCGGCGAGGCCGCCGCCATCGATAAACTGGGACAGTTCCTCGATGGCCCATTGGACCGCTACAAGACGGATCGCGATTTTCCGGCGCGTCCGGCGACTTCACGTCTCTCCCCGCATCTGGCCCTCGGCGAAATCTCTCCCTTCCGTATCTGGGATGCCACGCGCGGCCTGGGCGACATCCCGCGCGAAGACCTGATCCATTTCCGCAAGGAACTGGTCTGGCGCGAATTCTGCCATCACCTGCTTTTCCATTTTCCCGATCTTGCCGAAAAAAACTGGAATGCGCGTTTCGACGCGCTGACCTGGCAGGAGGACTCCCGGCGCTTCGGGGCATGGACCCGCGGGATGACCGGCTATCCCATCGTCGATGCCGGCATGCGCCAGCTCTGGCGCGACGGCATCATGCACAACCGGGTGCGGATGATCGTCGGCTCCTTCCTCGTCAAGGATCTGCTGATCGACTGGCGACAGGGCGAACGCTGGTTCCGCGACACGCTGGTGGATGCCGACCCCGCCTCCAACCCCGCCAACTGGCAATGGGTGGCGGGCACCGGCGCCGATGCCTCGCCTTTCTTCCGGGTGTTCAACCCGATACTCCAAGGCGAGAAATTCGATGCATCGGGGGACTACGTGCGTAGCTTCGTGACGGAAATCGCCGGCCTGCCGGACAAGTTCATCCACCGTCCTTTCGAAGCGCCGGCCGAGGTGCTGCGCAAGGCCGGCATCGAATTGGGCGTCACCTACCCTCGCCCGATCGTCGATCATGCGCAGGCGCGTCAGCGGGCGCTGGGAGCCTATGAGGCAGTCAAGCGGACAGCGTGA
PROTEIN sequence
Length: 481
LASPPPILLWFRKDLRLDDNLALTAAVETGRPVIPVYILDESDATIAPLGAAQRWWLHHSLKSLRKSLRATGNDLLLRRGPSEKILQELIDATGADTIFANRIHEPQRLDRERVFAEAQKQRGLRFTAFAGQLLHDPQRLATGSGGAFRVYTPFWNAFQRQHEPRPPVEAPSSIPAFRAPPETDDLDAWNCVPAKPDWAAHFPQSWTPGEAAAIDKLGQFLDGPLDRYKTDRDFPARPATSRLSPHLALGEISPFRIWDATRGLGDIPREDLIHFRKELVWREFCHHLLFHFPDLAEKNWNARFDALTWQEDSRRFGAWTRGMTGYPIVDAGMRQLWRDGIMHNRVRMIVGSFLVKDLLIDWRQGERWFRDTLVDADPASNPANWQWVAGTGADASPFFRVFNPILQGEKFDASGDYVRSFVTEIAGLPDKFIHRPFEAPAEVLRKAGIELGVTYPRPIVDHAQARQRALGAYEAVKRTA*