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SCN18_10_11_15_R1_B_scaffold_237_3

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1046..1306)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS66 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC05_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 86.0
  • Bit_score: 168
  • Evalue 1.80e-39
Mobile element protein {ECO:0000313|EMBL:AIH15786.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 86.0
  • Bit_score: 168
  • Evalue 2.50e-39
transposase similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 86.0
  • Bit_score: 166
  • Evalue 2.50e-39

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGCTCAAGCGTTGGGATGGCTTCACGTCATTCCTCGAGGATGGCAGGATTTGCCTGACGAACAATGCGGCCGAGCAAGCCCTGCGAGGCTTCGCGCTCGGCAGGAAGTCCTGGCTCTTCGCCGGATCGGACCGTGGTGCTGACCGTGCCGCGTTCATGGCGACACCGCTCATGACCGCCAAGCTCAACCACATCGATCCGCAGGCATGGCTTGCCGACGTTCTCGCCCGCATCGCCGACACGCCGATCACCAGGCTGTAG
PROTEIN sequence
Length: 87
MLKRWDGFTSFLEDGRICLTNNAAEQALRGFALGRKSWLFAGSDRGADRAAFMATPLMTAKLNHIDPQAWLADVLARIADTPITRL*