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SCN18_10_11_15_R1_B_scaffold_237_11

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7944..8621

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F389_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 225.0
  • Bit_score: 357
  • Evalue 7.00e-96
Amino acid ABC transporter membrane protein 1, PAAT family {ECO:0000313|EMBL:EYR82831.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 225.0
  • Bit_score: 370
  • Evalue 8.60e-100
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 227.0
  • Bit_score: 251
  • Evalue 1.50e-64

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGATCGACTTGCAGGGCTTTGGTGACCAAATTGCCGTCGGCGCAATGACAACGTTCCGGATTGCAATGGCCAGCTTGGTGCTTGGGATCGGCGTCGGCCTTTTGGGGGCAACGGCAAAGCTTAGCCAGTTCCAGGTGCTGCGGCGGCTGGCGAATGCCTATACGACGATCATTCGCGGCGTTCCCGAACTTCTCATCATACTTATCCTCTACTTCGGCGGCACGGTCGCCTTGACGGCGCTTTTCGGTCGTTACGTAGAGGTTGATGCGTTCGCGGCGGGCGTTTTTTCGCTGACCATTGTCTTCGGCGCATATGCAGCCGAGGTGTTCCGAGCTGCAATTCAAGCTGTGCCCACCGGCCAGATCGAGGCCGCTCAAGCTCTCGGGCTGTCCAAGGCGCTCACTTGGCGCCTTGTTGTCGTGCCGCAGATGTGGCGATACGCGCTGCCCGGACTTGGAAATCTTTGGCTCACATTGCTGAAGGACACGGCCCTCGTTTCCGTGGTCGGCCTGGAAGACGTGATGCGAAAGACCGGCGTAGCCGCCGGTTCAACCCACACCCCCCTGACCTTCTATTCCATCGCCGCCAGCATCTATCTCTCCTTCACGTCGATCTCCCTGGTGTGCCTCACCCTTCTTGAGCGGCGCGCCAACCGCGGCGTCCGCATCGCAGAATGA
PROTEIN sequence
Length: 226
MIDLQGFGDQIAVGAMTTFRIAMASLVLGIGVGLLGATAKLSQFQVLRRLANAYTTIIRGVPELLIILILYFGGTVALTALFGRYVEVDAFAAGVFSLTIVFGAYAAEVFRAAIQAVPTGQIEAAQALGLSKALTWRLVVVPQMWRYALPGLGNLWLTLLKDTALVSVVGLEDVMRKTGVAAGSTHTPLTFYSIAASIYLSFTSISLVCLTLLERRANRGVRIAE*