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SCN18_10_11_15_R1_B_scaffold_237_12

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 8632..9390

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F390_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 251.0
  • Bit_score: 369
  • Evalue 1.50e-99
Amino acid ABC transporter membrane protein 2, PAAT family {ECO:0000313|EMBL:EYR82832.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 257.0
  • Bit_score: 370
  • Evalue 1.30e-99
nocM; opine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 238.0
  • Bit_score: 265
  • Evalue 1.50e-68

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGAACTGGTATCTCATTGTTGAGGCCCTGCCGTTGCTCCTCGAGGGGGCTCTCCTCACGGTCAAGTTGACTGCGACGTCCCTTGTGCTTGGACTTTTCATCGCATTGCCGCTTGCACTGCTGAGGGCATCACCTTCCCGGGCGCTCTCCCGTCCCATTCTTTTGTACACGTTCGTGTTGCGCGGAACCCCGCTTCTTGTCCAGCTCTTCCTGATCTATTACGGTGCAAGCCAGGTCGAGTGGGTTCGCTCAAGCATCCTCTGGAGTATCTTGAGGGAGCCATATTGGTGCGCCCTCATCGCCTTCTCATTGAACAATGCCGCATACACGACGGAAATCCTCCGTGGAGGAATTCGTGCAGTGCCATCAGGCGAAATCGAGGCTGCGAAGGCCCTCGGCATGTCCTACGCGCTGCGAACGCGTCGGATCGTCCTACCGACAGCGTTCCGTCTTTCGCTTCCGACCTACGCCAACGAGATAGTGTTGATGCTGAAGGCGAGTTCTCTCGCCAGCACGATCACCCTCATGGAACTGACAGGCACTGCCCGCAAGATCGTCGCTCAGACCTTCTCGCCATACGAGGTCTTCATTTCCGCAGCGTTGATCTATCTCGGCATCACCTTTGTGGTCGTTCACGTAGTTGAACGCGTGGAGCGGCATGTCACAAGACACCTGCGGCGCGTTGAGTTTCAGAACGACTACGACGAGCAAGCGCGCGATATGACGCAGATCCCGGCGCTTGAGCAGGTGGCACGATGA
PROTEIN sequence
Length: 253
MNWYLIVEALPLLLEGALLTVKLTATSLVLGLFIALPLALLRASPSRALSRPILLYTFVLRGTPLLVQLFLIYYGASQVEWVRSSILWSILREPYWCALIAFSLNNAAYTTEILRGGIRAVPSGEIEAAKALGMSYALRTRRIVLPTAFRLSLPTYANEIVLMLKASSLASTITLMELTGTARKIVAQTFSPYEVFISAALIYLGITFVVVHVVERVERHVTRHLRRVEFQNDYDEQARDMTQIPALEQVAR*