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SCN18_10_11_15_R1_B_scaffold_237_25

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(20325..21491)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCX9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 388.0
  • Bit_score: 729
  • Evalue 1.50e-207
Putative soluble lytic transglycosylase {ECO:0000313|EMBL:EYR82769.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 388.0
  • Bit_score: 729
  • Evalue 2.20e-207
Soluble lytic murein transglycosylase-like protein similarity KEGG
DB: KEGG
  • Identity: 24.8
  • Coverage: 359.0
  • Bit_score: 66
  • Evalue 1.60e-08

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCGTAAGGCGATCATAATTCTGCTCTCCGCAACAACACTCGCCGGAGCGCCGGCACCCTCGGCATGGGCCGACATTCCCGTGATCGACGATGATGTGAAGGAGAAGCGGGCAGAGGACGAAGGACATTCCAAGCAGGACACAGAAACACAATCCGACCAGCTCGAGGAGCAGTCGGTGACGAACTGCAACATCTCCCAGAAGGAGAAGAACCGCCGCCTCTATCGCTCGCCGGCGCATGCCGTGAAAGAGGACGCCAAGAATGTCGAGCTTATCAAGCATTATGCGGAAAAGTACAACGTGCCGGTCGGTCTTGCCCTGTCGGTGGCGCATGCGGAATCCGGCATCTCGACCTGCTCCGGCTCGCCGACCGGCGTGAAGGGCGTGATGCAGCTGACCAAGCGGACCGGCAAGGGCATGGGCTTCGACCGCGACATCAACGAGGAAAATATCGAAGGCGGCGTCAAATATCTCGGCATGGGCGTCAACAAGTGCGGCAGCACCGATTATGCCTGCCTCGCCTCCTGGTACAACGGTTCGACGGCCGCCGAACAGAAGAACTGGGCCGGCAAGGTCGGCCGGAACCATACCTGGTTCAACGCCTATGCCGGCGGCTCAAACATCGAGGACATCTCCTCGCCGTCGTTCAAATCCTATGTCGATTACGGCTCCGGAGCGACGCGCAGCTCCAACAGCGCCGCAGCCGGCGCGGTCGACCGTGCCGTTTCGGGGATCGACGCGAGCACGGCGCGCGTCCAGGAGGCGGGCCGCCGCATCGATGCTCTGTCCGCCTCGGTCGGCGCGTCGGAGATCTATCAGGATGCCTGGGACGACAACACGCAGGCCCGCGTCGTCAATGCCGAACTGCTGAACAACCTGATCACCGCCCGCAACCTCTTCAACGAGCTGCTGCAGGCGCGCATGCAGATGAACCTGTCGAAGACGTCCGAAACGGCCAAGACCCTGAAATCCGACAGCAAGGTCAATCCCTATAGCTGCGATCCGGTCATCCTCGAAGAAATGAAGGTGCCACGCGAGGATTGGCCGCGTTGCGCCGTGGTCGCCGCCGCCGACGCCGATACAGAAATTCTCTCGTCCGGCGGCACGGACCGCTCGATCGGCAACAATCTTCTATCCATCCAGAACGCCGCCAACGCGGCCGATTAA
PROTEIN sequence
Length: 389
MRKAIIILLSATTLAGAPAPSAWADIPVIDDDVKEKRAEDEGHSKQDTETQSDQLEEQSVTNCNISQKEKNRRLYRSPAHAVKEDAKNVELIKHYAEKYNVPVGLALSVAHAESGISTCSGSPTGVKGVMQLTKRTGKGMGFDRDINEENIEGGVKYLGMGVNKCGSTDYACLASWYNGSTAAEQKNWAGKVGRNHTWFNAYAGGSNIEDISSPSFKSYVDYGSGATRSSNSAAAGAVDRAVSGIDASTARVQEAGRRIDALSASVGASEIYQDAWDDNTQARVVNAELLNNLITARNLFNELLQARMQMNLSKTSETAKTLKSDSKVNPYSCDPVILEEMKVPREDWPRCAVVAAADADTEILSSGGTDRSIGNNLLSIQNAANAAD*