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SCN18_10_11_15_R1_B_scaffold_464_24

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 14492..15178

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusG n=1 Tax=Rhizobium meliloti RepID=UPI0003732296 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 200.0
  • Bit_score: 166
  • Evalue 1.80e-38
Uncharacterized protein {ECO:0000313|EMBL:KDR87210.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 225.0
  • Bit_score: 170
  • Evalue 2.30e-39
nusG1; Transcription antitermination protein nusG similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 200.0
  • Bit_score: 166
  • Evalue 8.60e-39

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGGTGAAAACGAAGGGCAGGCGGGCCGGGGCTCACCAGGCCGGGACCGAATCACTTTCGGATTCCGAGCGTGGGTGGCAGCGGTGGCGGCAGCAGCGCGTCACGCGACGGCTGCGGCTCGCAAGGCAACAGCTCGCCAAAGCCTCGGCCAAGCTGGTCGAGGCAGACCGGGAAAGCGCTCGGTGGTTTTGCCTGACGGTTTCGGGTGGCAAGGAATTTTCTGTTGAAAAGCTGCTGACCGATGCGGGCGTCCAGGTGCTTTTGCCGAGCGAAAAAGTGGTTTGGGTGAAGCGCGGAAAGAAGGTTGAGGGTGAGCGCCTGATGTTCCCTGGCTATCTTCTGGTGCGTATCGTGCCGTCGGCGGAAGCCTTCGAGGGCCTGCGCAGGCAAGAGCGGCAAGGCGTGACGGGTTTCGTAAGCGGCCCAACGGGTTACCATGTTATCTCCGACCGGGAATTGAACCGTTGGTGGCAGCTTTCCGACGCAGAAATCGGCGCCATGGAGACGGATAAGACGATCGGGCAGGGGTCGCGGGTGCGGGTCAAGCAAGGGTTCTGGGCGGGCCTTACATGCGTTGTCATTGATGTGAAGTGGAGACGTAAACCTACCGCTCGGCTTCAGATCGAAGGTGCAGCGTCGGCGATGCCGCTCGATAAAATGCCTATTGCATTTCTGGAAAAGCTGTGA
PROTEIN sequence
Length: 229
MVKTKGRRAGAHQAGTESLSDSERGWQRWRQQRVTRRLRLARQQLAKASAKLVEADRESARWFCLTVSGGKEFSVEKLLTDAGVQVLLPSEKVVWVKRGKKVEGERLMFPGYLLVRIVPSAEAFEGLRRQERQGVTGFVSGPTGYHVISDRELNRWWQLSDAEIGAMETDKTIGQGSRVRVKQGFWAGLTCVVIDVKWRRKPTARLQIEGAASAMPLDKMPIAFLEKL*