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SCN18_10_11_15_R1_B_scaffold_830_24

Organism: SCN18_10_11_15_R1_B_SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7_63_17

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 15736..17100

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 454.0
  • Bit_score: 869
  • Evalue 2.00e-249
Virulence sensor histidine kinase PhoQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQH8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 454.0
  • Bit_score: 799
  • Evalue 1.10e-228
putative sensory transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 439.0
  • Bit_score: 449
  • Evalue 1.00e-123

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGAGATGGCCAACCTCCATTCGCAGCCGCCTCCTGCTGATTTCCGCGTTGACCGTGAGCCTCGCGCTGACACTGACCGTCACCTTGCTGGTCTCGCTCTTCTCCAGCAACATCCGCAACCGCATCGATGCGGAGCTGACCAGCCATATCAACACGCTGGCCGGCGCGCTGTCCTTTGCCGCCGACGGCACGCTCCAGCGCCCGGAAAGCCCGCTCGACCAGCGCTTCGCCACGCCCTATGGCGGGCTTTACTGGCAGATCGTCGACGATGCGCGGGGGCAGACCGTCCGCTCGCTGTCGCTGTTCGACACGGCCCTTGCCCTGCCCATGGACAGGCACGCCGAGGGCGCGGTTCATCGCTACCTGCTGCCCGGCCCGGCCGGAAGTTCATTGATCGTCCTCGAGCGGCTCGTGCAGGTCGCTGCACCGGAGGGGAAACGCGCGCTGCGCATCGCGGTCGCCATCGACGCGCAAACGCTGGAGGAGGCCAGAGCCGCCTTCATCCGCGACATCCTGCCGGCCGTCGCCGGGCTCGGCGTCTTCCTCGTCGTCGCGTCGATCCTGCAGCTCACCCTCGGGCTGCGGCCGCTGGCGGCGCTGAACGAAGGGATCGTGCGCATCCGCGAGCGGCGTGCCAACCAGTTGACCGGCGCCTATCCCAGTGAATTCCAGAGCACCGTGGCGGCAGTCAATGCGCTTCTGGATACGCAGGAAGCGATGATGGGCAAGGCGAGGAAGCGCGCGGCCGACCTCGCCCACGGCCTGCGCACGCCGCTGACGGTGCTCTCGAACGATGTCCTCACTCTGCGCGACAAGGGTGAGGCGGCCATGGCGGACGAACTGGAGCACCTGGCGTCCGTCATGCGTAATCATGTGGAACGGGAACTGGCGCTTGCCCGCATCGCCGCCAGCGCGGACCTGCGCCGCTCGGACGCCGACGTAGCCATGATCGTCGGCGAACTTGTGCGCATCCTCAAGCGCTCCCCTTCCGGCGAGCGGCTGCGGTTCGAGATCGACGGCCCAAACACCGAGACCGTGCCCATGGACCCAGCCGACTTTCGCGAACTCATCGGCAACCTGCTCGAAAATGCCGTCAAATGGGCGACGGCCGAAATTCGCGTGCGCTGGAAGCGCAACGAAGACGGCCTGCGTCTGACGATCTCGGACGACGGTCCGGGCGTGCCGGAGCAAGAACTCGGCAATCTCACCCGCCGCGGCTGGCGTCTTGACATGGCATCCCCCGGCTCTGGCCTCGGTCTCTCCATCGTTCGTGAAATCGTCGATGTCTATCGCATCGGTTTTATGCTGCGGAACAGAAAGGCCGATAGCGGGCTGGAAGCCGAGCTTCTGTTCGCTCATACATGA
PROTEIN sequence
Length: 455
MRWPTSIRSRLLLISALTVSLALTLTVTLLVSLFSSNIRNRIDAELTSHINTLAGALSFAADGTLQRPESPLDQRFATPYGGLYWQIVDDARGQTVRSLSLFDTALALPMDRHAEGAVHRYLLPGPAGSSLIVLERLVQVAAPEGKRALRIAVAIDAQTLEEARAAFIRDILPAVAGLGVFLVVASILQLTLGLRPLAALNEGIVRIRERRANQLTGAYPSEFQSTVAAVNALLDTQEAMMGKARKRAADLAHGLRTPLTVLSNDVLTLRDKGEAAMADELEHLASVMRNHVERELALARIAASADLRRSDADVAMIVGELVRILKRSPSGERLRFEIDGPNTETVPMDPADFRELIGNLLENAVKWATAEIRVRWKRNEDGLRLTISDDGPGVPEQELGNLTRRGWRLDMASPGSGLGLSIVREIVDVYRIGFMLRNRKADSGLEAELLFAHT*