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SCN18_10_11_15_R1_B_scaffold_20_29

Organism: SCNpilot_BF_INOC_Bordetella_67_10_67_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(28082..29056)

Top 3 Functional Annotations

Value Algorithm Source
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y193_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 315.0
  • Bit_score: 267
  • Evalue 1.10e-68
tctC; extracytoplasmic binding receptor similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 315.0
  • Bit_score: 267
  • Evalue 3.00e-69
Candidate extracytoplasmic binding receptor {ECO:0000313|EMBL:AEG93494.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 315.0
  • Bit_score: 267
  • Evalue 1.50e-68

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAAATCGCTGTGTGTATTGCGTCACCTGCTTGCCGCCGCCTTGCTGGCGCTGCCCTGCGCCGTTTCCGCCGCCGCGCCGCCGGTGCCGGGGCCGGTCAGGATCCTGGTCGGCTTTCCCGCCGGCGGCACCATCGATGTGGTCGCGCGGCTGGTGGCCGAGCAGATGCAGGGCGACCTGGGCGTGCCCGTGGTGGTCGAGACCCTGGCCGGCGCGGGCGGACAGCTGGCGGCGCAGGCGCTCAAGCGCGCCGCGCCGGACGGCCGCACGCTGATGGTCGCGCCCGACCATACCGCCGTCATCGTGCCGCTGACCGTGGCCAAACCCGGCTTCGACAGCCGGACGGACTTCGCGCCGGTCGGCATGGTGGCCGATTACGCGGGCGCGCTGGCCGTCAGCCACGCGAGCGGGATCAAGGACCTGCGCGATCTGATGCGCCACGTGCAGGCGCACCCGGCCGCGGGCGGCGTGGGCGTGTCGGCGCCGGGAAGCAAGCCGCAGTTCCAGCTGGACGCGCTGGCCAGGTCGCAGAAGCTGCCCTTGTCGGCGGTGCCCTATCGCGGCTCGGTGCCCATGGTGCAGGACCTGGCCGGCGGACACATCGCGGCGGGCATCACGGCGCTGGGCGATTTCCTGGAGTTCCATCGCGCCGGCAAGCTGCGCGTGATCGCCGTGACGGGCGAGCGCCGCTCCGGTGTGCTGCCCGAGGTTCCCACGGCGGCCGAGTCCGGCTATCCGTTGCGGCTGGACTTCTGGGTGGGCCTGTTCGCGCCGGCCGGAACGCCGCAACCGCTGATCGCCCGCTTCAATGCCGCGCTGAACAAGGCGCTGGACGTGCCCAAGGTGCGCGAGCGCATGGCGGCGGTGGTGTTCGACCCGCGGCCCGGCCCGCCGTCGGCCTTGCAGCAGCGCATCGCCACGGAACTGGAACAGTGGGAGCCCATCATTGCCGCCTCGGGGTGGGTCAGGCAATGA
PROTEIN sequence
Length: 325
MKSLCVLRHLLAAALLALPCAVSAAAPPVPGPVRILVGFPAGGTIDVVARLVAEQMQGDLGVPVVVETLAGAGGQLAAQALKRAAPDGRTLMVAPDHTAVIVPLTVAKPGFDSRTDFAPVGMVADYAGALAVSHASGIKDLRDLMRHVQAHPAAGGVGVSAPGSKPQFQLDALARSQKLPLSAVPYRGSVPMVQDLAGGHIAAGITALGDFLEFHRAGKLRVIAVTGERRSGVLPEVPTAAESGYPLRLDFWVGLFAPAGTPQPLIARFNAALNKALDVPKVRERMAAVVFDPRPGPPSALQQRIATELEQWEPIIAASGWVRQ*