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SCN18_14_9_16_R1_B_scaffold_1716_6

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: 4001..4945

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMR2_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 308.0
  • Bit_score: 341
  • Evalue 7.30e-91
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EYF07374.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 305.0
  • Bit_score: 410
  • Evalue 1.80e-111
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 308.0
  • Bit_score: 341
  • Evalue 2.10e-91

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTTCGATCCGGTCACGCTCGACCAGCTCCGCGCCCTCGTCACCGTCGTCGAGGAGGGCAGCTTCTCTGCCGCCGCGAGGAAGCTCCAGCGAGTGCAGTCCGCCGTGAGCACCTCGATGGCGAACCTCGAGTCGCACCTCGGCGTGTCGATCTGGGATCGTTCGACGAAGGTGGCGCGGCTCACGGAGCAGGGTCAGGCGGTGCTCGCCGCGGCCCGGCGCGTCCTCGCGGAGGTCGACGGGCTCCGTCGTCTGACCGCGGGCATGGTGACCGGCCTCGAGGCGTCGGTCTCGCTGTGCATCGATGCGCTGTTTCCTCTGAGCGCGCTCATCGATGCGTGCAAGGGCTTCGCGAAGGAGTTCCCGTCGGTCGACCTCCGCATCGACACCGAGCTGATGACCGCGGTGTCCGCGCGTGTGCTCGCGGGCAGCGCGACGCTCGGCGTCGTCAGCCCGCGCGGGCTCCTTCCGGGGCTCGAGCGCAAGGCCCTCTCGCGCATCTGGATGGTGCCCGTCGTCAGCCCTCGGCATCCCCTCGCCAAGCTCGAAGGAGAGCTCTCGCAGAAGGAGCTCGCCGACACAATCCAGATCGTCCTCTCCGAGCGGGCCGGCACCGGCGTGGCCGATCAGGCGGTCCTCTCACCGCGGACGTGGCGTGTCGCGGACCTTCACACGAAGCACATGATGCTTCGCGGCGGGCTCGGGTGGGGCAACCTCCCCGAGCACCTCGTCCACGACGACATCGAAGCGGGAAGGCTCGTCGCGATCCGCCCGGAGGCGTGGGGTGAGGAGGAGCACACGCTCTATCTCTCGGCGGTGTACCGACCCGACACGACCTTCGGCCCCGCCCACCAGTGGCTCCTCGAGCAGCTCGGGGCGCTGTGCGCCCGCGACTCCGGCACGCCTCGACGCCGCAAGCCGCGAGCCCGTCGAACGAAGGGCTGA
PROTEIN sequence
Length: 315
MFDPVTLDQLRALVTVVEEGSFSAAARKLQRVQSAVSTSMANLESHLGVSIWDRSTKVARLTEQGQAVLAAARRVLAEVDGLRRLTAGMVTGLEASVSLCIDALFPLSALIDACKGFAKEFPSVDLRIDTELMTAVSARVLAGSATLGVVSPRGLLPGLERKALSRIWMVPVVSPRHPLAKLEGELSQKELADTIQIVLSERAGTGVADQAVLSPRTWRVADLHTKHMMLRGGLGWGNLPEHLVHDDIEAGRLVAIRPEAWGEEEHTLYLSAVYRPDTTFGPAHQWLLEQLGALCARDSGTPRRRKPRARRTKG*