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SCN18_14_9_16_R1_B_scaffold_5701_3

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: 2277..3869

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBC3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 453.0
  • Bit_score: 200
  • Evalue 2.60e-48
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:EGD48327.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 453.0
  • Bit_score: 200
  • Evalue 3.60e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 469.0
  • Bit_score: 191
  • Evalue 5.80e-46

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Taxonomy

SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGACGCGACTCAGTCGACGAACGATCCTCTCCGCCCTTTCGACGAGCGCCTGCGCGCTACTGGTAGCTGCATGTCAGTCCCAGCCTCCGCCGGCATCCTCGCCCGGAGCGAAGCCTGGTGACGCCGCGGTGGAGGTTTCGTCCATCGCCGTCGCGACTGGATCGTCGCTTCCCGACTGCGACGCCTCGAACAACCTGGCGGTCCACTACGTGCTCGACGAGCAGCAGTTCGCGGTCTGCGTCGACGGCACGTGGCAGCGCGTCGATGTGCGCGGCGCAACGGGCTCGACCGGGCCTGCGGGCGCGAAGGGCGAGACGGGCCCGACCGGTCCTGATGGCGCGAAGGGCGAGACGGGCGAGGCCGGCGCGAAGGGCGAGACCGGCGAGACCGGTGCGAAGGGCGAGACCGGCGAGACCGGCGCGAAGGGCGAGACTGGCGACGCCGGCGCGAAGGGCGAGACGGGCGAGACCGGCGCGACGGGACCCGCGGGCCCCGCAGGCGAGACCGGCGAGGCGGGGGCAACCGGCCCTGCGGGCCCAGCCGGCGCGGCCGGCGCGAGCTCTCTGATCAAGGTGACGAACGATGGCTGTGCATGCGAGTACGGCGGGCTGCGGATCGAGACGGGCCTCGACGCGAACGGCAACGGCGCGCTCGATGCCGGGGAGATCGCGAGCACCTCGTACTTGTGTCACGGCGCAGGCGGCCAGGCCCCGCGAACGCTCGCGTACACCGGAGGTTATGCCGGCTTCGCGAGTGCCGCGGTGGGGAACACCTTGCGCCCGGGTGACACGATCACCGAAGCGAATGCGTACGGCGGCTTCTACTTCCGCGTGGGGCCCGACGTCACCAGCGTTCGCGTCGCGATGACGGGCGCGTCCGGCTCGGCTGGCGGAACTGGCCAAGGTGGCACGGGTGGCACCGGGACGGTCGACCTGACCTCCGCTTTCTTCACGGCGAAGGGGCAGAGCGGCTTCTGGATCATCGTCGGTCAGGCAGGACAGGCCTCCGCGGGTGATCCTTCGCGCGGCGGCGGCGTCCCGGCGTCCACGATGCGGGCCTTCAACGGCGGTGGAGCGGGCACCGACTGGAGCTCCGGCGCGAACACGTTCTCCTTTGCGGCCGGCGGCGGTGGCGGTACGGACCTCCGATTCGTCTACGACGGCGCGCGCTGCACGCCCATCAGCGGCGATCCGACGGCGAGCTGGGCAAGCCGCTTCGCGATCGTCGGCGGCGGCGGTGGCGGCACGAACAACAGCAGTGCGGCCGGCGGCTACGGCGGCGGCTTCAACGCATCCGGCGGCACTGCAGCCGGCGGTGGGGGTACCGGCGGCGGTAGCGCGGCCGGCGGCAACATCAACGGCGCGCTCGGGCTCGGCGGCGACGCCCCGCAGGACGCCACCGAGGGCTGGGCCGGAGGTGGTGGTGGCGGTTACTACGGCGGCGGTGCCAGCGCGGCGCACCGCGGCGGCGGCGGCGGCAGCGGCTACCTCATCTCGGCGGCGGGCCTTTCGCAAGTGAGCACGTCGGACGGCGCGTCGGGCGCCAACAACACGACGAGCACGCACGGTTCGTTCACGATCACCGTTCAGTGA
PROTEIN sequence
Length: 531
MTRLSRRTILSALSTSACALLVAACQSQPPPASSPGAKPGDAAVEVSSIAVATGSSLPDCDASNNLAVHYVLDEQQFAVCVDGTWQRVDVRGATGSTGPAGAKGETGPTGPDGAKGETGEAGAKGETGETGAKGETGETGAKGETGDAGAKGETGETGATGPAGPAGETGEAGATGPAGPAGAAGASSLIKVTNDGCACEYGGLRIETGLDANGNGALDAGEIASTSYLCHGAGGQAPRTLAYTGGYAGFASAAVGNTLRPGDTITEANAYGGFYFRVGPDVTSVRVAMTGASGSAGGTGQGGTGGTGTVDLTSAFFTAKGQSGFWIIVGQAGQASAGDPSRGGGVPASTMRAFNGGGAGTDWSSGANTFSFAAGGGGGTDLRFVYDGARCTPISGDPTASWASRFAIVGGGGGGTNNSSAAGGYGGGFNASGGTAAGGGGTGGGSAAGGNINGALGLGGDAPQDATEGWAGGGGGGYYGGGASAAHRGGGGGSGYLISAAGLSQVSTSDGASGANNTTSTHGSFTITVQ*