ggKbase home page

SCN18_14_9_16_R1_B_scaffold_3391_11

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: comp(9790..10101)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL21_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 103.0
  • Bit_score: 151
  • Evalue 3.50e-34
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 103.0
  • Bit_score: 154
  • Evalue 7.60e-35
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 103.0
  • Bit_score: 151
  • Evalue 9.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_P_Burkholderiales_64_62 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGTACGCGGTCATCAAAACGGGCGGAAAGCAGTATCGGGTAGCTCAGGGCGATCGGCTCCGTGTCGAGAAGCTCAACGGCAACGTCGGCGACACCGTGACCCTCGGCGAGGTCCTCCTCGTCGGCGCCGGCGACGGCGTGAAGGTCGGCGCTCCCCTGGTCGGCGGTGCGAAGGTCGAGGCGAAGATCGTCGCCCAGGACCGCTCGCCGAAGGTCATCATCTTCAAGTTCCGCCGTCGCAAGAACTACCGCAGGAAGTCCGGTCATCGTCAGCCGTTCACGGCGCTCGAGATCACCGGCATCACGGGCTGA
PROTEIN sequence
Length: 104
MYAVIKTGGKQYRVAQGDRLRVEKLNGNVGDTVTLGEVLLVGAGDGVKVGAPLVGGAKVEAKIVAQDRSPKVIIFKFRRRKNYRRKSGHRQPFTALEITGITG*