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SCN18_14_9_16_R1_B_scaffold_4678_6

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: comp(5529..5903)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGY8_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 111.0
  • Bit_score: 68
  • Evalue 3.60e-09
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF04891.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 79
  • Evalue 2.20e-12
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 115.0
  • Bit_score: 62
  • Evalue 5.60e-08

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 375
ATCGTGGGGACGCACCGTCGCGGCCTCCGCCGCCGCGACGGGATCCTGTCGTCGAGCGAGGCCGCCGATGCGAAGCGCGAGGTGATCGCCGACGGGGCTCCGGACGCATTCGCGCTCCAGGCCGCGAACGAGCAGCTCACCGACGTCCAGCGCGCGCTCGCGACGCTCGAGCCCGACCAAGCGGCCGTCTTCGTCCTGTTCGAGATCGAACAGCATTCGTGCGCCGACATCGCCGAGACGCTGGGACTGCCCGTCGGGACCGTCCATTCGCGCCTTCACTACGCACGGACGGCATTCACGGAGGCGTTCGCGAGGATCTCGCGCAGTCGCATGAAGCTCTCCGCAGGCACGCCGAAGGGAGGAGGCCAGCCATGA
PROTEIN sequence
Length: 125
IVGTHRRGLRRRDGILSSSEAADAKREVIADGAPDAFALQAANEQLTDVQRALATLEPDQAAVFVLFEIEQHSCADIAETLGLPVGTVHSRLHYARTAFTEAFARISRSRMKLSAGTPKGGGQP*