ggKbase home page

SCN18_14_9_16_R1_B_scaffold_879_4

Organism: SCN18_14_9_16_R1_B_SCNpilot_BF_INOC_Dechloromonas_67_13_66_13

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 3356..4717

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SF61_GALCS similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 448.0
  • Bit_score: 571
  • Evalue 4.80e-160
Porin {ECO:0000313|EMBL:GAO36737.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 437.0
  • Bit_score: 622
  • Evalue 2.50e-175
Carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 448.0
  • Bit_score: 571
  • Evalue 1.40e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Dechloromonas_67_13 → SCNpilot_BF_INOC_Dechloromonas_67_13 → SCNpilot_BF_INOC_Dechloromonas_67_13 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
GTGCCGAACCTCGACCGCCTGCCCGGCTGCGCCCTCGCAATCCTCACCGCCCTCGCCGCCTTCCTGGTCCTTGCCGCCGCGCCGGCCCGGGCGGCGGACGACGCTCCGGAACACGAAGACTGGACGGCGCGCTTCCAGTCGACCTACATCATGCAGAAGAAGCCGGGCTTCACGGCCCGCTACAGCGGCGCGAACAGCCTTCTCACGACGCGCGAACAGAGCTATACGCTAAGCGCCACGGCGCACTTCGGCGTGCGCGCCTGGGACGGCGGCGAACTGTACTTCAACCCCGAAATGGCGCTCGGCGAGCCGCTCTCCAACCTCACCGGGCTGGGCGGCTATTACAACGGCGAAATCACGCGCGCCGGCGGCAGCAACCCGACCTTCTACCGCCAGCGCCTGTTCCTGCGCCAGACCTGGAACCTCGGCGGCGAACGCGAGCACATCGACGCCGACCTCAACCGGATGGCCGGCTTCGTCGACCGGAACCACGTCGTGCTGACCGTCGGCAATTTCTCGACGCTGGACATCTTCGACGACAACGCCTACGCCAAGGACCCGCGCACCCAGTTCATGAACTGGGGCAACATGACCTACGCCGCCTACGATTACGCGGCCGACGCGCGCGGCTTCGGCTGGGGCTTTGCCGCCGAGTGGTACCGCGCCGACGGCTGGGTTTTCCGCATCGGACGCATGACCGGCCCGCGCGAGCCGAACATGCTGCCGACCGACCCGCGGATCGGCAAGCACTACGGCGACCAGATCGAGATCGAGCGCGCGCACGAAATCGGCGGCCAGCCCGGCAAGGTGCGCGTGCTCGGCTGGCGCAACCGGGCCGTCACCGCAAGCTTCCGTGATGCGCTGGACTACCTGCGCGCCAACCCCGGAGGCGATCCGCAGACGATCCTGAAAGTCCGCAACGGGGAAAAGATCAAGTACGGCATCGGCCTCAACGTCGAACAGGCGATCGACGAAAATCTCGGGGTTTTCCTGCGCGCGATGAAGGCCGACGGGCGGACGGAAACCTACGCCTTCACCGAAGTCGACGGCTCGCTCTCGCTCGGCGGCGCGCTCAAGGGCGCCGCCTGGGGGCGCGCGCAGGACACCTTCGGCGTGGCCCTCCTGCGCAACACGCTCTCCCCGGACCGACGCGCCTACCTGGCCGCCGGCGGGATTTCCTTCTTCATTGGCGACGGCGCGCTGAACTATCGTCCGGAACGGATCGCGGAAGCCTATTACAGCCTGGAACTGCTGAAGAACACGACGCTGACCCTGAACGCCCAGCACTTCGCCAACCCCGCCTACAACGCCGACCGCGGACCGGTGAACATCTTCGGCATGCGCCTGCACACCGAGTTCTAG
PROTEIN sequence
Length: 454
VPNLDRLPGCALAILTALAAFLVLAAAPARAADDAPEHEDWTARFQSTYIMQKKPGFTARYSGANSLLTTREQSYTLSATAHFGVRAWDGGELYFNPEMALGEPLSNLTGLGGYYNGEITRAGGSNPTFYRQRLFLRQTWNLGGEREHIDADLNRMAGFVDRNHVVLTVGNFSTLDIFDDNAYAKDPRTQFMNWGNMTYAAYDYAADARGFGWGFAAEWYRADGWVFRIGRMTGPREPNMLPTDPRIGKHYGDQIEIERAHEIGGQPGKVRVLGWRNRAVTASFRDALDYLRANPGGDPQTILKVRNGEKIKYGIGLNVEQAIDENLGVFLRAMKADGRTETYAFTEVDGSLSLGGALKGAAWGRAQDTFGVALLRNTLSPDRRAYLAAGGISFFIGDGALNYRPERIAEAYYSLELLKNTTLTLNAQHFANPAYNADRGPVNIFGMRLHTEF*