ggKbase home page

SCN18_25_8_15_R1_B_scaffold_813_2

Organism: SCN18_25_8_15_R1_B_SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7_59_10

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(1129..2547)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000374E806 similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 421.0
  • Bit_score: 345
  • Evalue 4.40e-92
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 426.0
  • Bit_score: 308
  • Evalue 1.70e-81
Outer membrane efflux protein {ECO:0000313|EMBL:ABJ88804.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 426.0
  • Bit_score: 308
  • Evalue 8.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAATCAGGAAACTAAAAACCGGACAAGGCAATGGTTGCTCAGAGGAAATCTCCGGGTTGCACTCTTGCTTATCACCTTCGGAGCGCAGATTCACTTGGCAAAGGCGCAGAATAAACAATTCAGTGGCGCGCACATCCAACCTGCAATGCTGGCGAATGCACCTTTCAGCAGGCTGAAGCTTACACTGGCCGGAGCTGTTGATCTGGCGCTCAAGCAGAATCTCGACATCCAGATAGCCAATATCGAAACCGCGAGTAAACAGCAGGATCGTTTGATCTCGCGCTCGGAGTTGCTTCCACATGTGAGCTTTGATGCGGACGACGCTATCACGCGATACAACACGAAGGCCCAGCTAGGTATCCAGCCCTCAATTATTCCCCATGAAGTCGGCCCGTACCAGTCCATTCACGTCGGACCAACATTCTCAACTCCGATTTTCGATCTGACTCTGATTCGTCAATACCAAGCGAGCGGACACCGTTTGCTCGCAACGCGCGCCGATGAGCAAACAGTCCACGAAGGTACTGTCCTGCTGGCTGTTAGCGAATACATGGCGCATCTTCGCGCGCTCGCCAGCATCACCGCTGCTGAGTCGCGCGTAGAGCTGGCCGACCGGCTGGCGCATCAGGCGCAAGACCTGCTAAACGATGGTGTAGCGAGCAAGATTGACGTGTCGCGGGCTCAAGTACGGCTCAGAGAAGAGAAACAAGTGTTGGTTGATGACCAGCGTGATGCGGAGACTACTCTCTATGCGCTGAAGCGCATCCTGAACGTTCCAGACGGCGAGCAGGTCGAGTTCGCTGACCAGCAAAACTTTTTTTCGACACCTTCGCTCGATGTTTCCGATCCGCTGTCAACCGCGCTTGAACAACGCCCCGAATTGCACGCTCTGTCTGAGAGCATCAAGGCGGCTGAATCGGCACACAAAGCGGCTGTGGCGGAATCCATGCCGAATCTGACCTTTGAGGGGAGATGGAATGAGCAGGGGCAGACGTTCAGCACGCTGACTCCCGGATATGAATATCGATTCAATGTGAGGATTCCCATCTTCACCGGCGGACGGCTTAGCGCCGAGAGGAAGAGCACGGCACTGGCAGAGCAACGGACGCAGAAACAACTCGCCCAGGAACGGAATCTAGTAACCGAGCAGGTGCGCGATGGGCAGGTTGCGTTACAAGCAGCCTTGCACCAGGTGGAGCTTGGCCGACAGGAAGTGCAACTGGCCAATGAGGAAGTCTCGCTTTCGCAAGGGCGCTTTCAGTCGGGCGTAAGCGACAACATTGAGGTCACGACCGCGCAGGATGCGCTTGCTCGAGCGAACGACACGGAAATTGGCGCGCTGTTCCATTACAACATCGCACGTGCGCAGCTCGCGCGCGCAATTGGCAGTGTAGAGCGGACCTATACCCACCCCTAA
PROTEIN sequence
Length: 473
MNQETKNRTRQWLLRGNLRVALLLITFGAQIHLAKAQNKQFSGAHIQPAMLANAPFSRLKLTLAGAVDLALKQNLDIQIANIETASKQQDRLISRSELLPHVSFDADDAITRYNTKAQLGIQPSIIPHEVGPYQSIHVGPTFSTPIFDLTLIRQYQASGHRLLATRADEQTVHEGTVLLAVSEYMAHLRALASITAAESRVELADRLAHQAQDLLNDGVASKIDVSRAQVRLREEKQVLVDDQRDAETTLYALKRILNVPDGEQVEFADQQNFFSTPSLDVSDPLSTALEQRPELHALSESIKAAESAHKAAVAESMPNLTFEGRWNEQGQTFSTLTPGYEYRFNVRIPIFTGGRLSAERKSTALAEQRTQKQLAQERNLVTEQVRDGQVALQAALHQVELGRQEVQLANEEVSLSQGRFQSGVSDNIEVTTAQDALARANDTEIGALFHYNIARAQLARAIGSVERTYTHP*