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SCN18_25_8_15_R1_B_scaffold_4052_4

Organism: SCN18_25_8_15_R1_B_Microbacterium_70_8

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(2242..2796)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003137B82 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 178.0
  • Bit_score: 266
  • Evalue 1.70e-68
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 178.0
  • Bit_score: 247
  • Evalue 1.20e-62
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 176.0
  • Bit_score: 221
  • Evalue 1.80e-55

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Taxonomy

CN-SCN_Microbacterium_200x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCGCTGCAGGAGCCGTACGACGATGTCGCGCTGGTGGCACAGGCCGCGGCGGGCAGCGAGTACGCGTTCCGACAGCTCTACCGCGCGTATGTGCGGCCGGTCTACTGGCTCGCGCACGGGTTGCTGCGCGACGCCCAGGACGCGGAGGACGTCACGCAGGAGACGTTCCTGGTCGCGTGGCGACGCCTGCCGGACCTCGAGCTGGTCGGCGACTCGCTGCTGCCGTGGCTGGCGACAGTGTGCCGGTTCCAGGCTGCGAACCGCATGCGGCGGCAGCGGCGGGAGCGGGAGCACACCGCACCTCTGCCGGACGAGGTGCCGATCGCCCTCGACGTCGCCCGCCACGTGGCAGAGGCGGAGACGGTGGAGCTGATCCTGCGCGAAGTCGGCGGTCTGAGCGAGCTCGACCGCGGCATCTTCCGCCTGTGCGCAACGGAGGGGTACACCTATCAGGCCGCGGCCGAGGCACTCGGCGTGCCTCATGGCGTGGTCCGCAACCGTCTCTCCCGCATCCGGACCCGGCTGCGGAACGTCGTCAGGGAGAGCACATGA
PROTEIN sequence
Length: 185
MPLQEPYDDVALVAQAAAGSEYAFRQLYRAYVRPVYWLAHGLLRDAQDAEDVTQETFLVAWRRLPDLELVGDSLLPWLATVCRFQAANRMRRQRREREHTAPLPDEVPIALDVARHVAEAETVELILREVGGLSELDRGIFRLCATEGYTYQAAAEALGVPHGVVRNRLSRIRTRLRNVVREST*